Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g032780.1.1 | Tomato | nucleus | 87.67 | 90.57 |
| Solyc10g018710.1.1 | Tomato | nucleus | 68.95 | 88.3 |
| Solyc05g012840.1.1 | Tomato | nucleus | 61.64 | 60.54 |
| PGSC0003DMT400059117 | Potato | nucleus | 87.21 | 57.19 |
| Solyc02g077250.2.1 | Tomato | nucleus | 92.24 | 57.06 |
| Solyc02g065800.1.1 | Tomato | cytosol, plastid | 19.63 | 30.28 |
| Solyc07g053410.2.1 | Tomato | cytosol | 29.68 | 26.64 |
| GSMUA_Achr8P19990_001 | Banana | nucleus | 28.31 | 25.73 |
| Solyc10g008780.1.1 | Tomato | nucleus | 51.14 | 19.24 |
| Solyc12g014140.1.1 | Tomato | nucleus | 30.59 | 17.01 |
| Solyc07g062680.1.1 | Tomato | nucleus | 30.59 | 16.75 |
| Solyc03g045030.1.1 | Tomato | nucleus | 13.24 | 15.85 |
| Solyc06g069460.1.1 | Tomato | plastid | 20.09 | 15.83 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 31.96 | 15.56 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 31.96 | 15.42 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 31.96 | 15.32 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 19.63 | 15.14 |
| Solyc02g089830.1.1 | Tomato | cytosol, nucleus, plastid | 16.44 | 14.94 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 28.31 | 14.59 |
| Zm00001d043423_P001 | Maize | nucleus | 28.77 | 14.52 |
| KXG33398 | Sorghum | nucleus | 29.68 | 14.41 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 28.77 | 14.13 |
| Solyc03g115010.1.1 | Tomato | plastid | 21.92 | 14.08 |
| Solyc08g048370.2.1 | Tomato | cytosol | 20.55 | 13.8 |
| Zm00001d039371_P001 | Maize | mitochondrion | 32.42 | 12.57 |
| Solyc08g048390.1.1 | Tomato | nucleus | 21.92 | 12.4 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 32.88 | 12.2 |
| Os01t0213800-01 | Rice | mitochondrion | 31.51 | 11.92 |
| Solyc05g009900.1.1 | Tomato | nucleus | 17.81 | 11.05 |
| OQU86111 | Sorghum | plastid | 31.51 | 11.0 |
| Solyc03g119770.2.1 | Tomato | nucleus | 16.89 | 10.69 |
| Solyc04g006980.1.1 | Tomato | nucleus | 17.81 | 10.4 |
| Zm00001d012725_P002 | Maize | plastid | 29.68 | 9.31 |
| Solyc06g069240.1.1 | Tomato | nucleus | 15.53 | 8.37 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 7.31 | 7.44 |
Protein Annotations
| MapMan:15.5.19 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | UniProt:K4D8M8 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF41 | EnsemblPlantsGene:Solyc11g045640.1 | EnsemblPlants:Solyc11g045640.1.1 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000276A793 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:-:28476024..28476683
Molecular Weight (calculated)
25379.3 Da
IEP (calculated)
5.079
GRAVY (calculated)
-1.199
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLNPPMNH QCQVSDEEDG SEEEEEEEEE VFQENDIGNL QSHYQNQQMP QSVYKKQEKW ANFTVSEQEL NKGTRRMKPK RAKTDVIEGH GGRIIRATGR
101: KDRHSKVSTA KDPKDLRVRL SPNTAIQFYD VQDRLGYDRP SKAIDWLIIE AKAAIDALGE FPNNFHSTKL NPKKMQYSFD QEQSPEFSQE NRGVPKSEYG
201: VQEKQQEVNY DIPNLFSLN
101: KDRHSKVSTA KDPKDLRVRL SPNTAIQFYD VQDRLGYDRP SKAIDWLIIE AKAAIDALGE FPNNFHSTKL NPKKMQYSFD QEQSPEFSQE NRGVPKSEYG
201: VQEKQQEVNY DIPNLFSLN
001: MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
Arabidopsis Description
TCP3TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.