Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g012840.1.1 | Tomato | nucleus | 61.02 | 96.86 |
| PGSC0003DMT400059117 | Potato | nucleus | 87.29 | 92.52 |
| Solyc11g045640.1.1 | Tomato | nucleus | 57.06 | 92.24 |
| Solyc05g032780.1.1 | Tomato | nucleus | 55.08 | 91.98 |
| Solyc10g018710.1.1 | Tomato | nucleus | 44.35 | 91.81 |
| GSMUA_Achr8P19990_001 | Banana | nucleus | 25.71 | 37.76 |
| Solyc02g065800.1.1 | Tomato | cytosol, plastid | 12.71 | 31.69 |
| Solyc07g053410.2.1 | Tomato | cytosol | 20.9 | 30.33 |
| Solyc10g008780.1.1 | Tomato | nucleus | 45.76 | 27.84 |
| Solyc07g062680.1.1 | Tomato | nucleus | 29.1 | 25.75 |
| Solyc12g014140.1.1 | Tomato | nucleus | 27.97 | 25.13 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 27.97 | 22.0 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 27.97 | 21.81 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 27.97 | 21.66 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 25.99 | 21.65 |
| Zm00001d043423_P001 | Maize | nucleus | 25.99 | 21.2 |
| KXG33398 | Sorghum | nucleus | 26.84 | 21.06 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 25.99 | 20.63 |
| Solyc06g069460.1.1 | Tomato | plastid | 14.41 | 18.35 |
| Zm00001d039371_P001 | Maize | mitochondrion | 28.53 | 17.88 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 14.12 | 17.61 |
| Solyc03g045030.1.1 | Tomato | nucleus | 9.04 | 17.49 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 28.81 | 17.29 |
| Os01t0213800-01 | Rice | mitochondrion | 28.25 | 17.27 |
| Solyc02g089830.1.1 | Tomato | cytosol, nucleus, plastid | 11.58 | 17.01 |
| Solyc03g115010.1.1 | Tomato | plastid | 16.38 | 17.01 |
| Solyc08g048370.2.1 | Tomato | cytosol | 14.69 | 15.95 |
| OQU86111 | Sorghum | plastid | 27.97 | 15.79 |
| Solyc08g048390.1.1 | Tomato | nucleus | 16.95 | 15.5 |
| Zm00001d012725_P002 | Maize | plastid | 25.71 | 13.04 |
| Solyc05g009900.1.1 | Tomato | nucleus | 12.43 | 12.46 |
| Solyc03g119770.2.1 | Tomato | nucleus | 11.86 | 12.14 |
| Solyc04g006980.1.1 | Tomato | nucleus | 12.43 | 11.73 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 6.21 | 10.23 |
| Solyc06g069240.1.1 | Tomato | nucleus | 11.02 | 9.61 |
Protein Annotations
| MapMan:15.5.19 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | UniProt:K4B8V2 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF41 | EnsemblPlantsGene:Solyc02g077250.2 | EnsemblPlants:Solyc02g077250.2.1 |
| InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0002767B1D | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:-:42244262..42245988
Molecular Weight (calculated)
40347.6 Da
IEP (calculated)
5.279
GRAVY (calculated)
-0.836
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEECTKCTS VIFIYFFPLG PRCMKMNHQF QVSDEEDGSE EEEEEEEEVF QENDIGNLQS HYQNQQMPQS LCKKPEKWAN FTVSEQELNK GTRRMKPKRA
101: KTDVIEGHGG RIIRATGRKD RHSKVSTAKG PKDRRVRLSP NTAIQFYDVQ DRLGYDRPSK AIDWLIKEAK AAIDALGEFP NNFHSTKLNP QKMQYSFDQE
201: QSPEFSQENR GVPNSECGVQ DNQQEVNYDI PNLFSSSDGF KIPFLSDLQS HPHGHFLNFQ SLQDDTVLSS GNHHQGRFFT TTSVNHFPSV LSQNQVFSHR
301: EPLQSSFFPL MSDPLSTQLE TLSYGFSNDG FSGIISSASR IQGEEEQATF FTAS
101: KTDVIEGHGG RIIRATGRKD RHSKVSTAKG PKDRRVRLSP NTAIQFYDVQ DRLGYDRPSK AIDWLIKEAK AAIDALGEFP NNFHSTKLNP QKMQYSFDQE
201: QSPEFSQENR GVPNSECGVQ DNQQEVNYDI PNLFSSSDGF KIPFLSDLQS HPHGHFLNFQ SLQDDTVLSS GNHHQGRFFT TTSVNHFPSV LSQNQVFSHR
301: EPLQSSFFPL MSDPLSTQLE TLSYGFSNDG FSGIISSASR IQGEEEQATF FTAS
001: MGLKGYSVGE GGGEIVEVQG GHIIRATGRK DRHSKVFTSK GPRDRRVRLS AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KTAIDKLELG ETTTTTTRQE
101: PVNTKPESPT LVFQRENNDQ TQFVAANLDP EDAMKTFFPA TTTTNGGGGT NINFQNYPHQ DDNNMVSRTT TPPPNLSQDL GLSLHPFQGN NNTVVVPETN
201: NFTTTHFDTF GRISGWNHHD LTMTSSSSSE HQQQEQEERS NGGFMVNHHP HHHHHQPSMM TLLNSQQQQV FLGGQQQQQQ RGTLQSSLFP HSFRSWDHHQ
301: TTSDHHHHQN QASSMFASSS QYGSHGMMMM QGLSFPNTTR LLHGEEATQP NSSSSPPNSH L
101: PVNTKPESPT LVFQRENNDQ TQFVAANLDP EDAMKTFFPA TTTTNGGGGT NINFQNYPHQ DDNNMVSRTT TPPPNLSQDL GLSLHPFQGN NNTVVVPETN
201: NFTTTHFDTF GRISGWNHHD LTMTSSSSSE HQQQEQEERS NGGFMVNHHP HHHHHQPSMM TLLNSQQQQV FLGGQQQQQQ RGTLQSSLFP HSFRSWDHHQ
301: TTSDHHHHQN QASSMFASSS QYGSHGMMMM QGLSFPNTTR LLHGEEATQP NSSSSPPNSH L
Arabidopsis Description
TCP10Transcription factor TCP10 [Source:UniProtKB/Swiss-Prot;Acc:O82277]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.