Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026037 | Potato | cytosol, nucleus, plastid | 89.21 | 90.34 |
| Solyc03g045030.1.1 | Tomato | nucleus | 32.78 | 43.17 |
| Solyc02g065800.1.1 | Tomato | cytosol, plastid | 15.35 | 26.06 |
| VIT_14s0083g00150.t01 | Wine grape | nucleus | 31.54 | 23.03 |
| KRH01497 | Soybean | plastid | 32.37 | 21.08 |
| KRH45185 | Soybean | plastid | 31.95 | 20.81 |
| KRG93829 | Soybean | nucleus, plastid | 35.27 | 20.43 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 27.8 | 20.3 |
| KRH35497 | Soybean | nucleus | 31.95 | 20.26 |
| KRH18263 | Soybean | plastid | 34.85 | 20.05 |
| Solyc03g119770.2.1 | Tomato | nucleus | 28.63 | 19.94 |
| Solyc10g018710.1.1 | Tomato | nucleus | 14.11 | 19.88 |
| KRG91334 | Soybean | nucleus | 30.71 | 19.73 |
| Solyc04g006980.1.1 | Tomato | nucleus | 30.29 | 19.47 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 21.16 | 19.32 |
| CDY12633 | Canola | nucleus | 25.73 | 19.25 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 21.58 | 19.05 |
| CDY01793 | Canola | nucleus | 27.8 | 18.98 |
| AT1G67260.1 | Thale cress | nucleus | 27.8 | 18.66 |
| Bra004212.1-P | Field mustard | nucleus | 26.14 | 18.48 |
| CDY07432 | Canola | nucleus | 26.97 | 18.47 |
| CDX96104 | Canola | nucleus | 26.56 | 18.23 |
| Solyc05g009900.1.1 | Tomato | nucleus | 26.56 | 18.13 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 21.99 | 17.97 |
| CDY46042 | Canola | nucleus | 25.73 | 17.92 |
| Bra034010.1-P | Field mustard | nucleus | 25.73 | 17.92 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 26.14 | 17.9 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 26.14 | 17.9 |
| Bra004097.1-P | Field mustard | nucleus | 25.73 | 17.87 |
| CDY28898 | Canola | nucleus | 26.14 | 17.8 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 26.14 | 17.8 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 26.14 | 17.65 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 21.16 | 17.17 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 26.56 | 16.84 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 25.31 | 16.67 |
| Solyc05g012840.1.1 | Tomato | nucleus | 15.35 | 16.59 |
| Solyc06g069240.1.1 | Tomato | nucleus | 27.8 | 16.5 |
| Os03t0706500-01 | Rice | nucleus | 26.56 | 16.49 |
| Solyc11g045640.1.1 | Tomato | nucleus | 14.94 | 16.44 |
| Zm00001d013467_P001 | Maize | nucleus | 24.07 | 16.16 |
| Solyc05g032780.1.1 | Tomato | nucleus | 13.69 | 15.57 |
| Solyc07g053410.2.1 | Tomato | cytosol | 14.94 | 14.75 |
| Solyc08g048370.2.1 | Tomato | cytosol | 18.26 | 13.5 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 14.94 | 12.68 |
| Solyc06g069460.1.1 | Tomato | plastid | 14.11 | 12.23 |
| Solyc02g077250.2.1 | Tomato | nucleus | 17.01 | 11.58 |
| Solyc08g048390.1.1 | Tomato | nucleus | 18.26 | 11.37 |
| Solyc07g062680.1.1 | Tomato | nucleus | 17.84 | 10.75 |
| Solyc12g014140.1.1 | Tomato | nucleus | 16.6 | 10.15 |
| Solyc03g115010.1.1 | Tomato | plastid | 14.11 | 9.97 |
| Solyc10g008780.1.1 | Tomato | nucleus | 15.35 | 6.36 |
Protein Annotations
| MapMan:15.5.19 | InterPro:CYC/TB1_R_domain | UniProt:G3BGU7 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EMBL:GQ496325 | InterPro:IPR017887 | InterPro:IPR017888 | PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF18 | EnsemblPlantsGene:Solyc02g089830.1 | EnsemblPlants:Solyc02g089830.1.1 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI00022A26A2 | SEG:seg | : | : | : | : |
Description
TCP transcription factor 7 [Source:UniProtKB/TrEMBL;Acc:G3BGU7]
Coordinates
chr2:-:51526499..51527306
Molecular Weight (calculated)
27340.2 Da
IEP (calculated)
10.220
GRAVY (calculated)
-0.807
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPFGNSSNG GNPILHSSFL NNQILLHQHD LPTHHHYLAA ANGHSIDSYA TNNVAINNKS KKQVKKDRHT KILTSQGHRD RRVRLSIGVA RKFFDLQDML
101: GYDKPSKTLD WLFTKSKLAI EDLINDVSKK STPLSIHNNN NNNNSECDED MIVPLAKKAK QERDSRAKAR ARARERTIKK IWTQIAPNRE ATASHYNNST
201: RNWNHDDVNP TIMSSMDAST ICCTSLPIVQ KAWDSYHGSQ I
101: GYDKPSKTLD WLFTKSKLAI EDLINDVSKK STPLSIHNNN NNNNSECDED MIVPLAKKAK QERDSRAKAR ARARERTIKK IWTQIAPNRE ATASHYNNST
201: RNWNHDDVNP TIMSSMDAST ICCTSLPIVQ KAWDSYHGSQ I
001: MSSSTNDYND GNNNGVYPLS LYLSSLSGHQ DIIHNPYNHQ LKASPGHMVS AVPESLIDYM AFKSNNVVNQ QGFEFPEVSK EIKKVVKKDR HSKIQTAQGI
101: RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK
201: AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ
301: NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF L
101: RDRRVRLSIG IARQFFDLQD MLGFDKASKT LDWLLKKSRK AIKEVVQAKN LNNDDEDFGN IGGDVEQEEE KEEDDNGDKS FVYGLSPGYG EEEVVCEATK
201: AGIRKKKSEL RNISSKGLGA KARGKAKERT KEMMAYDNPE TASDITQSEI MDPFKRSIVF NEGEDMTHLF YKEPIEEFDN QESILTNMTL PTKMGQSYNQ
301: NNGILMLVDQ SSSSNYNTFL PQNLDYSYDQ NPFHDQTLYV VTDKNFPKGF L
Arabidopsis Description
TCP1Transcription factor TCP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYG7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.