Factsheet for Zm00001d033673_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013467_P001	Maize	nucleus	80.33	81.89
TraesCS4D01G040100.1	Wheat	nucleus	56.83	59.09
TraesCS4A01G271300.1	Wheat	nucleus	56.83	59.09
TraesCS4B01G042700.1	Wheat	nucleus	57.1	59.04
Os03t0706500-01	Rice	nucleus	60.93	57.47
HORVU4Hr1G007040.1	Barley	nucleus	56.01	57.42
Zm00001d032217_P001	Maize	cytosol	20.49	31.25
Zm00001d020433_P001	Maize	nucleus	21.58	31.23
Zm00001d005737_P001	Maize	cytosol	21.58	28.62
GSMUA_Achr2P21050_001	Banana	mitochondrion	19.67	27.59
PGSC0003DMT400026037	Potato	cytosol, nucleus, plastid	16.94	26.05
PGSC0003DMT400010380	Potato	nucleus	19.67	25.81
Zm00001d050389_P001	Maize	nucleus	19.13	25.55
Solyc02g089830.1.1	Tomato	cytosol, nucleus, plastid	16.67	25.31
PGSC0003DMT400008673	Potato	nucleus	10.11	23.57
Solyc03g045030.1.1	Tomato	nucleus	11.48	22.95
GSMUA_Achr2P22480_001	Banana	cytosol	19.95	22.53
CDY18525	Canola	nucleus	17.21	22.26
CDX95517	Canola	nucleus	17.21	22.26
Bra037579.1-P	Field mustard	nucleus	17.21	22.11
VIT_14s0083g00150.t01	Wine grape	nucleus	19.13	21.21
CDY45852	Canola	nucleus	18.85	20.78
CDX81550	Canola	nucleus	19.13	20.71
Bra038350.1-P	Field mustard	nucleus	18.85	20.6
CDY33597	Canola	nucleus	18.03	20.43
KRH03810	Soybean	nucleus	21.04	20.26
KRH56692	Soybean	nucleus	20.77	20.21
KRH45185	Soybean	plastid	19.67	19.46
KRH01497	Soybean	plastid	19.67	19.46
Solyc06g069240.1.1	Tomato	nucleus	21.31	19.21
Solyc03g119770.2.1	Tomato	nucleus	17.76	18.79
CDY01793	Canola	nucleus	18.03	18.7
AT1G67260.1	Thale cress	nucleus	18.31	18.66
VIT_17s0000g04180.t01	Wine grape	nucleus	18.58	18.58
CDX96104	Canola	nucleus	17.76	18.52
PGSC0003DMT400014572	Potato	nucleus	19.13	18.52
AT1G68800.2	Thale cress	nucleus	18.31	18.51
KRH63057	Soybean	nucleus	19.4	18.44
CDY12633	Canola	nucleus	16.12	18.32
KRG93829	Soybean	nucleus, plastid	20.77	18.27
Bra004212.1-P	Field mustard	nucleus	16.94	18.18
Solyc04g006980.1.1	Tomato	nucleus	18.31	17.87
VIT_01s0011g02920.t01	Wine grape	nucleus	21.31	17.81
KRH18263	Soybean	plastid	20.22	17.66
CDY46042	Canola	nucleus	16.67	17.63
Bra034010.1-P	Field mustard	nucleus	16.67	17.63
PGSC0003DMT400019324	Potato	nucleus	18.31	17.59
CDX82339	Canola	nucleus	20.22	17.45
KRH54810	Soybean	nucleus	18.85	17.42
Bra001710.1-P	Field mustard	nucleus	20.22	17.41
CDY62798	Canola	nucleus	19.4	17.27
CDY52898	Canola	nucleus	19.95	17.18
AT3G18550.3	Thale cress	nucleus	20.22	17.05
CDY07432	Canola	nucleus	16.39	17.05
KRH35497	Soybean	nucleus	17.49	16.84
KRG91334	Soybean	nucleus	17.21	16.8
CDY28898	Canola	nucleus	16.12	16.67
Solyc05g009900.1.1	Tomato	nucleus	15.85	16.43
Bra004097.1-P	Field mustard	nucleus	15.57	16.43
PGSC0003DMT400002153	Potato	nucleus	15.03	15.54
Zm00001d010730_P001	Maize	cytosol, plastid	10.38	13.82
Zm00001d013119_P001	Maize	cytosol, nucleus, plastid	13.93	13.39
Zm00001d022256_P001	Maize	nucleus	11.48	13.0
Zm00001d007868_P001	Maize	nucleus	15.3	12.73
Zm00001d043368_P001	Maize	cytosol	9.84	12.72
Zm00001d034353_P001	Maize	cytosol	13.39	12.69
Zm00001d043423_P001	Maize	nucleus	14.75	12.44
Zm00001d038683_P001	Maize	cytosol	10.11	12.42
Zm00001d018806_P001	Maize	nucleus	14.48	12.13
Zm00001d008919_P001	Maize	nucleus, plastid	13.93	12.0
Zm00001d039371_P001	Maize	mitochondrion	15.03	9.73
Zm00001d012725_P002	Maize	plastid	14.75	7.74

Protein Annotations

MapMan:15.5.19	UniProt:A0A1D6L1J8	InterPro:CYC/TB1_R_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	InterPro:IPR017888	ProteinID:ONM08402.1	PFAM:PF03634	PFscan:PS51369
PFscan:PS51370	PANTHER:PTHR31072	PANTHER:PTHR31072:SF39	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00000AB27C
EnsemblPlantsGene:Zm00001d033673	EnsemblPlants:Zm00001d033673_P001	EnsemblPlants:Zm00001d033673_T001	SEG:seg	:	:

Description

teosinte branched1Transcription factor TEOSINTE BRANCHED 1

Coordinates

chr1:+:270553676..270554776

Molecular Weight (calculated)

38759.2 Da

IEP (calculated)

8.146

GRAVY (calculated)

-0.611

Length

366 amino acids

Sequence
(BLAST)

001: MDLPLYQQLQ LSPSSPKTDQ SSSFYCYPCS PPFAAADASF PLSYQIGSAA AADATPPQAV INSPDLPVQA LMDHAPAPAT ELGACASGAE GSGASLDRAA
101: AAARKDRHSK ICTAGGMRDR RMRLSLDVAR KFFALQDMLG FDKASKTVQW LLNTSKSAIQ EIMADDASSE CVEDGSSSLS VDGKHNPAEQ LGGGGDQKPK
201: GNCRGEGKKP AKASKAAATP KPPRKSANNA HQVPDKETRA KARERARERT KEKHRMRWVK LASAIDVEAA AASGPSDRPS SNNLSHHSSL SMNMPCAAAE
301: LEERERCSSA LSNRSAGRMQ EITGASDVVL GFGNGGGGYG DGGGNYYCQE QWELGGVVFQ QNSRFY

Best Arabidopsis Sequence Match ( AT1G68800.1 )
(BLAST)

001: MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL YDYLCY

Arabidopsis Description

BRC2TCP domain protein 12 [Source:TAIR;Acc:AT1G68800]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.