Factsheet for Zm00001d010730_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18493	Sorghum	cytosol	89.09	82.21
Zm00001d038683_P001	Maize	cytosol	86.18	79.53
Os05t0513100-01	Rice	nucleus	64.36	60.2
HORVU1Hr1G077080.1	Barley	nucleus	58.55	55.14
TraesCS1A01G332600.1	Wheat	nucleus	59.27	53.27
TraesCS1B01G346300.1	Wheat	nucleus	58.91	52.6
TraesCS1D01G335300.1	Wheat	nucleus	58.91	51.76
Solyc02g065800.1.1	Tomato	cytosol, plastid	25.82	50.0
Zm00001d043368_P001	Maize	cytosol	50.18	48.76
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	29.09	36.7
PGSC0003DMT400003453	Potato	nucleus, plastid	35.27	34.28
Solyc02g089020.1.1	Tomato	nucleus, plastid	35.27	34.15
VIT_14s0068g00330.t01	Wine grape	nucleus	37.45	29.51
KRH45058	Soybean	nucleus	37.45	29.01
KRH01308	Soybean	cytosol	38.91	27.86
CDX91977	Canola	nucleus	31.64	27.19
CDX74272	Canola	nucleus	31.64	27.19
Bra039158.1-P	Field mustard	nucleus	30.55	27.18
KRG93654	Soybean	nucleus	36.73	27.01
AT3G02150.2	Thale cress	nucleus	32.0	24.79
CDY60475	Canola	endoplasmic reticulum, golgi	30.91	21.41
Zm00001d013119_P001	Maize	cytosol, nucleus, plastid	28.0	20.21
CDY43255	Canola	endoplasmic reticulum, golgi	30.55	19.58
Zm00001d022256_P001	Maize	nucleus	22.91	19.5
Zm00001d034353_P001	Maize	cytosol	26.18	18.65
Zm00001d032217_P001	Maize	cytosol	16.0	18.33
Zm00001d007868_P001	Maize	nucleus	29.09	18.18
Zm00001d018806_P001	Maize	nucleus	28.73	18.08
Zm00001d050389_P001	Maize	nucleus	16.0	16.06
Bra001032.1-P	Field mustard	nucleus	31.27	15.99
Zm00001d008919_P001	Maize	nucleus, plastid	23.27	15.06
Zm00001d020433_P001	Maize	nucleus	13.82	15.02
Zm00001d005737_P001	Maize	cytosol	14.91	14.86
Zm00001d043423_P001	Maize	nucleus	20.73	13.13
Zm00001d039371_P001	Maize	mitochondrion	24.0	11.68
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	13.82	10.38
Zm00001d013467_P001	Maize	nucleus	11.27	8.64
Zm00001d012725_P002	Maize	plastid	21.09	8.31

Protein Annotations

MapMan:15.5.19	ProteinID:AQK94760.1	UniProt:B4FHV6	EMBL:BT036694	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	EMBL:KJ726826	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF67	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00017B73E9	EnsemblPlantsGene:Zm00001d010730	EnsemblPlants:Zm00001d010730_P001
EnsemblPlants:Zm00001d010730_T001	SEG:seg	:	:	:	:

Description

TCP-transcription factor 7Transcription factor TCP5

Coordinates

chr8:+:126238922..126239749

Molecular Weight (calculated)

29587.0 Da

IEP (calculated)

9.412

GRAVY (calculated)

-0.407

Length

275 amino acids

Sequence
(BLAST)

001: MISGNLTNED LGAGRTKAEG PTTAARAVAK SPVLPSSRHW PPSTESRIVR VSRVFGGKDR HSKVRTVKGL RDRRVRLSVP TAIQLYDLQD RLGLSQPSKV
101: VDWLLDAAQH EIDKLPPLQF PPQAAQDLVA HLPPPSMVAP FAADRAEADG DKRHCHAGVK GLMGLNNSIR LVNATMPLAH GLYYTPGESW TGTNADDAAA
201: HDHQTVAHGH SPFSSLLSLA APGPQLVFYS SEGGGFTMKE EATGYQFPVQ NSLDHSQGQL SLSSARSFLR PGNQV

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.