Factsheet for TraesCS1B01G346300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G332600.1	Wheat	nucleus	97.4	98.04
TraesCS1D01G335300.1	Wheat	nucleus	95.13	93.61
HORVU1Hr1G077080.1	Barley	nucleus	84.09	88.7
Os05t0513100-01	Rice	nucleus	59.74	62.59
Zm00001d010730_P001	Maize	cytosol, plastid	52.6	58.91
EES18493	Sorghum	cytosol	56.49	58.39
Zm00001d038683_P001	Maize	cytosol	55.52	57.38
TraesCS3B01G333400.1	Wheat	nucleus	47.08	51.79
Solyc02g065800.1.1	Tomato	cytosol, plastid	22.08	47.89
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	25.0	35.32
PGSC0003DMT400003453	Potato	nucleus, plastid	30.52	33.22
Solyc02g089020.1.1	Tomato	nucleus, plastid	30.19	32.75
KRH45058	Soybean	nucleus	35.39	30.7
VIT_14s0068g00330.t01	Wine grape	nucleus	33.77	29.8
KRH01308	Soybean	cytosol	35.06	28.12
Bra039158.1-P	Field mustard	nucleus	27.92	27.83
KRG93654	Soybean	nucleus	31.82	26.2
CDX91977	Canola	nucleus	26.95	25.94
CDX74272	Canola	nucleus	26.95	25.94
AT3G02150.2	Thale cress	nucleus	26.95	23.38
CDY60475	Canola	endoplasmic reticulum, golgi	27.6	21.41
CDY43255	Canola	endoplasmic reticulum, golgi	27.92	20.05
TraesCS2B01G025700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	12.99	19.61
TraesCS2B01G265800.1	Wheat	nucleus	26.3	19.1
TraesCS5B01G426200.1	Wheat	nucleus	24.68	18.81
TraesCS5B01G032000.1	Wheat	nucleus	17.53	18.0
Bra001032.1-P	Field mustard	nucleus	26.95	15.43
TraesCS3B01G164500.1	Wheat	nucleus	20.13	13.78
TraesCS5B01G205600.1	Wheat	cytosol	11.69	13.14
TraesCS5B01G002300.1	Wheat	nucleus	12.34	12.88
TraesCS4B01G042700.1	Wheat	nucleus	11.04	9.6

Protein Annotations

EnsemblPlants:TraesCS1B01G346300.1	EnsemblPlantsGene:TraesCS1B01G346300	InterPro:IPR017887	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	PANTHER:PTHR31072
PANTHER:PTHR31072:SF67	PFAM:PF03634	PFscan:PS51369	SEG:seg	MapMan:15.5.19	:

Description

No Description!

Coordinates

chr1B:+:575439926..575442519

Molecular Weight (calculated)

33107.8 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.384

Length

308 amino acids

Sequence
(BLAST)

001: MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN
101: AAQHEIDKLR PLQFPPHDDD LLLSAHHHHH HLQPTSSMTS MAMAPPFSHA TATAVAASMM VVDSDKAAQA HDGGGDLKGF MSLSNSLGLV NGAGAAMPTL
201: AAAQAGSYHH HYAAHEAWSN GGNNVHEQLG GHRSSPHVVP HHGLPFPSLL SLAPVSQFVF YTPEGGFAMK DVASDGQFPV DNLDDSQGQL SLSSRGEAFF
301: TQEARVDR

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.