Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45058 | Soybean | nucleus | 82.55 | 89.3 |
| KRG93654 | Soybean | nucleus | 60.68 | 62.3 |
| VIT_14s0068g00330.t01 | Wine grape | nucleus | 47.92 | 52.72 |
| PGSC0003DMT400003453 | Potato | nucleus, plastid | 33.33 | 45.23 |
| Solyc02g089020.1.1 | Tomato | nucleus, plastid | 32.03 | 43.31 |
| EES18493 | Sorghum | cytosol | 30.21 | 38.93 |
| Zm00001d010730_P001 | Maize | cytosol, plastid | 27.86 | 38.91 |
| Zm00001d038683_P001 | Maize | cytosol | 29.69 | 38.26 |
| CDX74272 | Canola | nucleus | 31.77 | 38.12 |
| CDX91977 | Canola | nucleus | 31.77 | 38.12 |
| Bra039158.1-P | Field mustard | nucleus | 30.47 | 37.86 |
| Os05t0513100-01 | Rice | nucleus | 28.12 | 36.73 |
| HORVU1Hr1G077080.1 | Barley | nucleus | 27.34 | 35.96 |
| KRH54711 | Soybean | plastid | 36.46 | 35.9 |
| AT3G02150.2 | Thale cress | nucleus | 33.07 | 35.77 |
| EES03657 | Sorghum | nucleus | 26.82 | 35.64 |
| Zm00001d043368_P001 | Maize | cytosol | 26.04 | 35.34 |
| TraesCS1B01G346300.1 | Wheat | nucleus | 28.12 | 35.06 |
| TraesCS1A01G332600.1 | Wheat | nucleus | 27.86 | 34.97 |
| TraesCS3D01G298900.1 | Wheat | nucleus | 25.0 | 34.91 |
| TraesCS3A01G302900.1 | Wheat | nucleus | 25.26 | 34.89 |
| HORVU3Hr1G073830.1 | Barley | nucleus | 25.26 | 34.89 |
| Os01t0763200-01 | Rice | cytosol | 27.86 | 34.85 |
| TraesCS3B01G333400.1 | Wheat | nucleus | 25.26 | 34.64 |
| KRH63215 | Soybean | nucleus, plastid | 34.38 | 34.11 |
| TraesCS1D01G335300.1 | Wheat | nucleus | 27.6 | 33.87 |
| KRH56798 | Soybean | nucleus | 33.07 | 32.48 |
| KRH03150 | Soybean | nucleus, plastid | 32.55 | 32.13 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 32.03 | 30.98 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 32.03 | 28.67 |
| Bra001032.1-P | Field mustard | nucleus | 31.77 | 22.68 |
| KRH25697 | Soybean | nucleus | 15.62 | 20.62 |
| KRH22307 | Soybean | nucleus | 18.23 | 20.35 |
| KRH27017 | Soybean | nucleus | 17.71 | 19.83 |
| KRH55819 | Soybean | nucleus | 16.15 | 18.62 |
| KRH58674 | Soybean | nucleus | 22.14 | 17.78 |
| KRH42567 | Soybean | nucleus | 21.61 | 17.73 |
| KRH55125 | Soybean | nucleus | 17.71 | 17.39 |
| KRH27317 | Soybean | nucleus | 16.67 | 16.98 |
| KRH26201 | Soybean | nucleus | 17.45 | 16.88 |
| KRH11155 | Soybean | nucleus | 22.4 | 16.83 |
| KRH21998 | Soybean | nucleus | 17.19 | 16.79 |
| KRH21093 | Soybean | nucleus | 22.14 | 15.98 |
| KRH56692 | Soybean | nucleus | 14.06 | 14.36 |
| KRH01497 | Soybean | plastid | 13.54 | 14.05 |
| KRH45185 | Soybean | plastid | 13.28 | 13.78 |
| KRH03810 | Soybean | nucleus | 13.54 | 13.68 |
| KRH63057 | Soybean | nucleus | 13.28 | 13.25 |
| KRH54810 | Soybean | nucleus | 13.02 | 12.63 |
| KRG91334 | Soybean | nucleus | 12.24 | 12.53 |
| KRH35497 | Soybean | nucleus | 12.24 | 12.37 |
| KRH18263 | Soybean | plastid | 12.76 | 11.69 |
| KRG93829 | Soybean | nucleus, plastid | 12.24 | 11.3 |
Protein Annotations
| EntrezGene:100816424 | MapMan:15.5.19 | EMBL:ACUP02011511 | EnsemblPlantsGene:GLYMA_18G268700 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR017887 | UniProt:K7MUZ0 | EnsemblPlants:KRH01308 | ProteinID:KRH01308 | ProteinID:KRH01308.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF5 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI0001B376A5 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:55247696..55250091
Molecular Weight (calculated)
43007.7 Da
IEP (calculated)
9.977
GRAVY (calculated)
-0.724
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPWNRILTI TKWKDKTQHL ATNNERHKIM IKSPKEADFP LKQEGHSQSI TDPEKAKASA SSVAQWPRLK DPRIVRVSRA FGGKDRHSKV FTIRGLRDRR
101: VRLSVPTAIQ LYDLQDRLGL SQPSKVVDWL LDAAKHEIDE LPPLPVVPSV NNFTLGHPSA VTSNEATTSN SQPNEQLLNI NRSIQWEGSN QNSTWKLKPK
201: EVSREMISTD KPNWISRSEE DKQGSNNEGP STRVIPNINL LPRANLNHPS FLGLLNTMPH GYQWEPSAGD VSHQLGNNGF ANQTDMHSIN VVPFPTSTLS
301: LSTGNSQILL CPPGTAQPYF PSHVTMDMDP RQINHYQMLS SGSQNPLANY LNHSFSLAMM THKPLHSPNS SKSPSHKDQD FPSN
101: VRLSVPTAIQ LYDLQDRLGL SQPSKVVDWL LDAAKHEIDE LPPLPVVPSV NNFTLGHPSA VTSNEATTSN SQPNEQLLNI NRSIQWEGSN QNSTWKLKPK
201: EVSREMISTD KPNWISRSEE DKQGSNNEGP STRVIPNINL LPRANLNHPS FLGLLNTMPH GYQWEPSAGD VSHQLGNNGF ANQTDMHSIN VVPFPTSTLS
301: LSTGNSQILL CPPGTAQPYF PSHVTMDMDP RQINHYQMLS SGSQNPLANY LNHSFSLAMM THKPLHSPNS SKSPSHKDQD FPSN
001: MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI SSSSSSWMKS KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM
Arabidopsis Description
TCP13Transcription factor TCP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7W5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.