Factsheet for TraesCS1A01G332600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G346300.1	Wheat	nucleus	98.04	97.4
TraesCS1D01G335300.1	Wheat	nucleus	94.44	92.33
HORVU1Hr1G077080.1	Barley	nucleus	85.95	90.07
Os05t0513100-01	Rice	nucleus	60.13	62.59
Zm00001d010730_P001	Maize	cytosol, plastid	53.27	59.27
EES18493	Sorghum	cytosol	57.52	59.06
Zm00001d038683_P001	Maize	cytosol	56.54	58.05
TraesCS3A01G302900.1	Wheat	nucleus	48.69	53.6
Solyc02g065800.1.1	Tomato	cytosol, plastid	22.55	48.59
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	25.49	35.78
PGSC0003DMT400003453	Potato	nucleus, plastid	31.05	33.57
Solyc02g089020.1.1	Tomato	nucleus, plastid	30.72	33.1
KRH45058	Soybean	nucleus	35.29	30.42
VIT_14s0068g00330.t01	Wine grape	nucleus	34.31	30.09
Bra039158.1-P	Field mustard	nucleus	28.43	28.16
KRH01308	Soybean	cytosol	34.97	27.86
KRG93654	Soybean	nucleus	32.35	26.47
CDX91977	Canola	nucleus	27.45	26.25
CDX74272	Canola	nucleus	27.45	26.25
AT3G02150.2	Thale cress	nucleus	27.45	23.66
CDY60475	Canola	endoplasmic reticulum, golgi	28.1	21.66
TraesCS2A01G018000.1	Wheat	cytosol	13.73	20.59
CDY43255	Canola	endoplasmic reticulum, golgi	28.43	20.28
TraesCS5A01G423900.1	Wheat	cytosol	25.82	19.51
TraesCS5A01G031900.1	Wheat	nucleus	17.97	18.52
Bra001032.1-P	Field mustard	nucleus	27.45	15.61
TraesCS2A01G251100.1	Wheat	plastid, vacuole	26.8	14.96
TraesCS3A01G140100.1	Wheat	nucleus	21.24	14.22
TraesCS5A01G001900.1	Wheat	nucleus	12.42	13.92
TraesCS5A01G207300.1	Wheat	cytosol	11.44	12.87
TraesCS4A01G271300.1	Wheat	nucleus	11.11	9.66

Protein Annotations

EnsemblPlants:TraesCS1A01G332600.1	EnsemblPlantsGene:TraesCS1A01G332600	InterPro:IPR017887	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	PANTHER:PTHR31072
PANTHER:PTHR31072:SF67	PFAM:PF03634	PFscan:PS51369	SEG:seg	MapMan:15.5.19	:

Description

No Description!

Coordinates

chr1A:+:520938227..520941012

Molecular Weight (calculated)

32941.6 Da

IEP (calculated)

7.272

GRAVY (calculated)

-0.400

Length

306 amino acids

Sequence
(BLAST)

001: MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN
101: AAQHEIDKLP PLQFPPHDDD LLLSAHHHHH HLQPTSSMTS MAMVPPFSHA TAAAASMMVV DSDKAAQAHD GGGDLKGFMS LSNSLGLVNG AGASMPTLAA
201: AQAGSYHHHY AAHEAWSNGG NNVQEQLGGH RSSPHVVPHH GLPFPSLLSL APVSQFVFYT PEGGFAMKDV ASDDQFPVDN LDDSQGQLSL SSRGEAFFTQ
301: EARVDR

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.