Factsheet for Os05t0513100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18493	Sorghum	cytosol	68.03	67.11
Zm00001d038683_P001	Maize	cytosol	67.01	66.11
Zm00001d010730_P001	Maize	cytosol, plastid	60.2	64.36
HORVU1Hr1G077080.1	Barley	nucleus	62.24	62.67
TraesCS1A01G332600.1	Wheat	nucleus	62.59	60.13
TraesCS1B01G346300.1	Wheat	nucleus	62.59	59.74
TraesCS1D01G335300.1	Wheat	nucleus	61.9	58.15
Os01t0763200-01	Rice	cytosol	53.74	51.47
Solyc02g065800.1.1	Tomato	cytosol, plastid	22.79	47.18
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	26.87	36.24
PGSC0003DMT400003453	Potato	nucleus, plastid	32.99	34.28
Solyc02g089020.1.1	Tomato	nucleus, plastid	31.97	33.1
KRH45058	Soybean	nucleus	37.76	31.27
VIT_14s0068g00330.t01	Wine grape	nucleus	37.07	31.23
CDX91977	Canola	nucleus	30.95	28.44
CDX74272	Canola	nucleus	30.95	28.44
KRH01308	Soybean	cytosol	36.73	28.12
Bra039158.1-P	Field mustard	nucleus	29.25	27.83
KRG93654	Soybean	nucleus	35.37	27.81
AT3G02150.2	Thale cress	nucleus	30.95	25.63
CDY60475	Canola	endoplasmic reticulum, golgi	28.91	21.41
Os03t0785800-01	Rice	nucleus	24.83	20.45
CDY43255	Canola	endoplasmic reticulum, golgi	28.91	19.81
Os07t0152000-01	Rice	nucleus	27.55	18.2
Os09t0410500-00	Rice	nucleus	15.99	17.41
Bra001032.1-P	Field mustard	nucleus	29.93	16.36
Os01t0755500-01	Rice	cytosol, mitochondrion	23.13	15.25
Os08t0432300-00	Rice	nucleus	13.95	13.85
Os01t0213800-01	Rice	mitochondrion	21.77	11.05
Os03t0706500-01	Rice	nucleus	14.29	10.82
Os12t0616400-01	Rice	cytosol, nucleus, peroxisome	3.74	5.29

Protein Annotations

MapMan:15.5.19	EntrezGene:4339298	ProteinID:AAV59297.1	EMBL:AK069938	ProteinID:BAF17938.1	ProteinID:BAS94856.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EMBL:GQ229484	InterPro:IPR017887	EnsemblPlantsGene:Os05g0513100
EnsemblPlants:Os05t0513100-01	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF67	UniProt:Q5TKH1
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00003BF58D	RefSeq:XP_015637968.1	SEG:seg	:

Description

TEOSINTE BRANCHED/CYCLOIDEA/PROLIFERATING CELL FACTOR 18Similar to PlCYC4 protein (Fragment). (Os05t0513100-01)

Coordinates

chr5:+:25436359..25438597

Molecular Weight (calculated)

30477.3 Da

IEP (calculated)

7.759

GRAVY (calculated)

-0.397

Length

294 amino acids

Sequence
(BLAST)

001: MTSNNSTNEE LGGGGRKAAD KPSGGGGAAA AVASSRHWSA STESRIVRVS RVFGGKDRHS KVRTVKGLRD RRVRLSVPTA IQLYDLQDRL GLSQPSKVVD
101: WLINAAQAEI DKLPPLQFPP HDHDLVAAAA SSMAPPPFAN GGDGHHGASA SSMLEDGDKA AGGGGMKAFM SLSNSLGLLN AATMPATLAA HHHHHHHAAA
201: YYAAAESWGN GGNGGHHHDV SHGVSPSAHN SPFPSLLSLA PGSHHQFVFY SPEGGGFAVK EAAAEQFPVD SLDHSQGQLT LSSARSFLHS GSQG

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.