Factsheet for HORVU1Hr1G077080.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G332600.1	Wheat	nucleus	90.07	85.95
TraesCS1B01G346300.1	Wheat	nucleus	88.7	84.09
TraesCS1D01G335300.1	Wheat	nucleus	85.96	80.19
Os05t0513100-01	Rice	nucleus	62.67	62.24
EES18493	Sorghum	cytosol	59.93	58.72
Zm00001d010730_P001	Maize	cytosol, plastid	55.14	58.55
Zm00001d038683_P001	Maize	cytosol	59.59	58.39
HORVU3Hr1G073830.1	Barley	nucleus	49.66	52.16
Solyc02g065800.1.1	Tomato	cytosol, plastid	22.95	47.18
PGSC0003DMT400068332	Potato	cytosol, nucleus, peroxisome, plastid	26.71	35.78
PGSC0003DMT400003453	Potato	nucleus, plastid	31.16	32.16
Solyc02g089020.1.1	Tomato	nucleus, plastid	30.82	31.69
KRH45058	Soybean	nucleus	35.62	29.3
VIT_14s0068g00330.t01	Wine grape	nucleus	34.93	29.23
Bra039158.1-P	Field mustard	nucleus	29.11	27.51
KRH01308	Soybean	cytosol	35.96	27.34
KRG93654	Soybean	nucleus	33.56	26.2
CDX91977	Canola	nucleus	28.42	25.94
CDX74272	Canola	nucleus	28.42	25.94
AT3G02150.2	Thale cress	nucleus	28.42	23.38
CDY60475	Canola	endoplasmic reticulum, golgi	28.77	21.16
HORVU2Hr1G060120.1	Barley	nucleus	29.11	20.63
CDY43255	Canola	endoplasmic reticulum, golgi	29.11	19.81
HORVU5Hr1G008340.2	Barley	nucleus	19.18	18.98
HORVU5Hr1G103400.1	Barley	nucleus	25.34	18.5
Bra001032.1-P	Field mustard	nucleus	27.74	15.06
HORVU5Hr1G061270.1	Barley	nucleus	12.33	13.19
HORVU5Hr1G000490.1	Barley	nucleus	13.36	13.13
HORVU3Hr1G028240.5	Barley	extracellular, golgi, mitochondrion	21.23	10.51
HORVU4Hr1G007040.1	Barley	nucleus	11.99	9.8
HORVU3Hr1G072670.2	Barley	nucleus	5.82	7.26
HORVU0Hr1G006890.2	Barley	cytosol	4.79	6.51

Protein Annotations

MapMan:15.5.19	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G077080	EnsemblPlants:HORVU1Hr1G077080.1
InterPro:IPR017887	UniProt:M0YKK9	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF67
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00029495FD	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:-:516267912..516270682

Molecular Weight (calculated)

31127.4 Da

IEP (calculated)

7.414

GRAVY (calculated)

-0.374

Length

292 amino acids

Sequence
(BLAST)

001: MISAGDHGND RRKFEPAAAG NKALQAAAAA SRHWSASTES RIVRVSRVFG GKDRHSKVRT VKGLRDRRVR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLN
101: AAQHEIDKLP PLHFPPHDDD LLLSAHHHHH LQSPASMAMV PPFSHATAAT ASMMVADGGK ATQSAHDGAG DLKGFMSLSN SLGLVNGAGA AMPSLAAAQA
201: GSYHHHYAAH EAWSNGGGNV VQEQLGGHRS SPFQSLLSLA PVSQFVFYTP EDGFAMKDVA SDDQFPVDNL NDSQGQLSLS SERSFLHSGG QG

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.