Factsheet for Os01t0755500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0674700-01
Os03t0729500-01
Os12t0484900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31070.1	Os03t0674700-01	AT2G22840.1	21245844
AT2G31070.1	Os03t0729500-01	AT2G22840.1	21245844
AT2G31070.1	Os12t0484900-01	AT2G22840.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33398	Sorghum	nucleus	71.3	70.51
Zm00001d043423_P001	Maize	nucleus	68.16	70.05
HORVU0Hr1G006890.2	Barley	cytosol	26.68	55.35
Zm00001d012725_P002	Maize	plastid	71.08	45.42
VIT_19s0014g01680.t01	Wine grape	nucleus	33.63	37.69
GSMUA_Achr3P31370_001	Banana	nucleus	21.52	36.78
Solyc07g062680.1.1	Tomato	nucleus	32.06	35.75
PGSC0003DMT400032269	Potato	nucleus	31.61	35.25
Solyc05g012840.1.1	Tomato	nucleus	17.26	34.53
KRH27317	Soybean	nucleus	29.15	34.48
KRH26201	Soybean	nucleus	29.82	33.5
AT3G15030.1	Thale cress	nucleus	31.39	33.33
KRH21998	Soybean	nucleus	29.37	33.33
Solyc12g014140.1.1	Tomato	nucleus	29.15	32.99
KRH55125	Soybean	nucleus	28.92	32.99
Bra021586.1-P	Field mustard	nucleus	25.56	32.57
KRH22307	Soybean	nucleus	25.11	32.56
GSMUA_Achr7P13980_001	Banana	nucleus	26.68	32.34
Bra027284.1-P	Field mustard	nucleus	29.15	32.02
Bra001579.1-P	Field mustard	nucleus	29.15	31.94
Bra030952.1-P	Field mustard	nucleus	24.66	31.88
KRH27017	Soybean	nucleus	24.44	31.78
Solyc07g053410.2.1	Tomato	cytosol	17.26	31.56
PGSC0003DMT400039786	Potato	nucleus	29.6	31.35
KRH25697	Soybean	nucleus	20.4	31.27
VIT_12s0028g02520.t01	Wine grape	nucleus	21.52	31.27
AT1G53230.1	Thale cress	nucleus	27.35	31.2
Solyc10g018710.1.1	Tomato	nucleus	11.88	30.99
PGSC0003DMT400024329	Potato	nucleus	20.4	29.26
Solyc11g045640.1.1	Tomato	nucleus	14.13	28.77
Bra018280.1-P	Field mustard	nucleus	22.2	28.37
KRH55819	Soybean	nucleus	21.08	28.23
PGSC0003DMT400059117	Potato	nucleus	20.63	27.54
AT2G31070.1	Thale cress	nucleus	22.2	27.42
Os01t0213800-01	Rice	mitochondrion	35.2	27.12
Solyc05g032780.1.1	Tomato	nucleus	12.78	26.89
Solyc02g077250.2.1	Tomato	nucleus	20.63	25.99
CDX97627	Canola	mitochondrion	15.47	25.18
VIT_10s0003g00870.t01	Wine grape	nucleus	21.3	24.87
Os05t0513100-01	Rice	nucleus	15.25	23.13
Os03t0785800-01	Rice	nucleus	17.26	21.57
Os01t0763200-01	Rice	cytosol	13.45	19.54
PGSC0003DMT400068478	Potato	nucleus	21.3	18.23
Os09t0410500-00	Rice	nucleus	10.76	17.78
Os07t0152000-01	Rice	nucleus	16.59	16.63
Solyc10g008780.1.1	Tomato	nucleus	21.08	16.15
Os03t0706500-01	Rice	nucleus	13.23	15.21
Os08t0432300-00	Rice	nucleus	9.87	14.86
Os12t0616400-01	Rice	cytosol, nucleus, peroxisome	4.48	9.62

Protein Annotations

MapMan:15.5.19	UniProt:A0A0P0V8B1	ProteinID:BAS74400.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	EnsemblPlantsGene:Os01g0755500	EnsemblPlants:Os01t0755500-01	PFAM:PF03634
PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF16	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000393C41D
SEG:seg	:	:	:	:	:

Description

PROLIFERATING CELL FACTOR 7Similar to Transcription factor PCF7 (Fragment). (Os01t0755500-01)

Coordinates

chr1:+:31699518..31701126

Molecular Weight (calculated)

47103.4 Da

IEP (calculated)

7.173

GRAVY (calculated)

-0.601

Length

446 amino acids

Sequence
(BLAST)

001: NLASCFNFRS SPFRLTVGER ELKLEEDKNQ LSKGLDPWTS NPTASASTLH YLLQEKERAQ QAHEQLQIYQ QQQGFGSFLQ HRIRQPASRG PGGGGGGGDG
101: GGSSGESTPV EALATAFGAG RIVRSAAGRK DRHSKVCTAR GLRDRRVRLA AHTAIRFYDV QDRLGYDRPS KAVDWLMRNA KAAIDELPDR AEAPPPPAAA
201: STEQPEATEQ ATSTSYGFGN TTGGTMTSAA SAAAGSFLPH SLGADRVSDS VKSLFPSSST ASGAASAGHD EYRGSPPDLL SRTTSNQQPQ ELCLTLQSNQ
301: HQIFSHVSSN HHGMISSAGV PGWPDHSQRM QAWHAPENST GDGRGGGNGD GYMFAMPSRQ GLDQSQLFSH GEPLQSSGRG WASARAWLDP LAVAAIHHQP
401: STMAAGQVGF GHLVGGAGGG GGFMGFLAPA AQRLEGEEEH GSEVIR

Best Arabidopsis Sequence Match ( AT3G15030.2 )
(BLAST)

001: MSDDQFHHPP PPSSMRHRST SDAADGGCGE IVEVQGGHIV RSTGRKDRHS KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GFDRPSKAVD WLIKKAKTSI
101: DELAELPPWN PADAIRLAAA NAKPRRTTAK TQISPSPPPP QQQQQQQQLQ FGVGFNGGGA EHPSNNESSF LPPSMDSDSI ADTIKSFFPV IGSSTEAPSN
201: HNLMHNYHHQ HPPDLLSRTN SQNQDLRLSL QSFPDGPPSL LHHQHHHHTS ASASEPTLFY GQSNPLGFDT SSWEQQSSEF GRIQRLVAWN SGGGGGATDT
301: GNGGGFLFAP PTPSTTSFQP VLGQSQQLYS QRGPLQSSYS PMIRAWFDPH HHHQSISTDD LNHHHHLPPP VHQSAIPGIG FASGEFSSGF RIPARFQGQE
401: EEQHDGLTHK PSSASSISRH

Arabidopsis Description

TCP4TCP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD44]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.