Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- mitochondrion 5
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68596 | Canola | cytosol, nucleus | 95.26 | 67.62 |
| CDX82453 | Canola | nucleus | 84.31 | 57.04 |
| CDX75802 | Canola | nucleus | 83.94 | 56.93 |
| CDY20097 | Canola | nucleus | 69.34 | 53.22 |
| CDY02519 | Canola | nucleus | 43.43 | 34.59 |
| GSMUA_Achr7P13980_001 | Banana | nucleus | 27.74 | 20.65 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 13.87 | 17.67 |
| CDY10772 | Canola | nucleus | 21.53 | 17.05 |
| CDY10771 | Canola | nucleus | 21.53 | 17.0 |
| CDY24724 | Canola | nucleus | 21.53 | 16.95 |
| GSMUA_Achr3P31370_001 | Banana | nucleus | 15.69 | 16.48 |
| KXG33398 | Sorghum | nucleus | 25.55 | 15.52 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 25.18 | 15.47 |
| Zm00001d043423_P001 | Maize | nucleus | 22.99 | 14.52 |
| CDX78849 | Canola | nucleus, plastid | 11.31 | 12.97 |
| Zm00001d012725_P002 | Maize | plastid | 22.63 | 8.88 |
| CDY60877 | Canola | nucleus | 11.31 | 8.66 |
| CDY55633 | Canola | nucleus | 10.95 | 7.85 |
| CDX90234 | Canola | nucleus | 8.39 | 7.47 |
| CDY59229 | Canola | nucleus | 8.39 | 7.35 |
| CDX99891 | Canola | nucleus | 7.66 | 6.62 |
| CDY26285 | Canola | nucleus | 7.66 | 6.6 |
| CDX91977 | Canola | nucleus | 6.57 | 5.62 |
| CDX74272 | Canola | nucleus | 6.57 | 5.62 |
| CDY01537 | Canola | nucleus | 6.2 | 5.54 |
| CDX81083 | Canola | nucleus, plastid | 4.74 | 5.33 |
| CDX78321 | Canola | nucleus, plastid | 4.74 | 5.28 |
| CDY01793 | Canola | nucleus | 6.57 | 5.1 |
| CDX96104 | Canola | nucleus | 6.2 | 4.84 |
| CDY58696 | Canola | nucleus | 5.84 | 4.4 |
| CDY02180 | Canola | nucleus | 5.84 | 4.37 |
| CDY12633 | Canola | nucleus | 5.11 | 4.35 |
| CDY46042 | Canola | nucleus | 5.47 | 4.34 |
| CDY07432 | Canola | nucleus | 5.47 | 4.26 |
| CDY28898 | Canola | nucleus | 5.47 | 4.24 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 5.47 | 3.78 |
| CDY47005 | Canola | nucleus, plastid | 4.01 | 3.65 |
| CDY68618 | Canola | nucleus, plastid | 3.65 | 3.31 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 5.11 | 3.26 |
| CDX81550 | Canola | nucleus | 3.28 | 2.66 |
| CDY33597 | Canola | nucleus | 2.92 | 2.48 |
| CDY18525 | Canola | nucleus | 2.55 | 2.47 |
| CDX95517 | Canola | nucleus | 2.55 | 2.47 |
| CDY45852 | Canola | nucleus | 2.92 | 2.41 |
| CDY52898 | Canola | nucleus | 2.92 | 1.88 |
| CDX82339 | Canola | nucleus | 2.55 | 1.65 |
| CDY62798 | Canola | nucleus | 1.82 | 1.22 |
Protein Annotations
| EnsemblPlants:CDX97627 | EnsemblPlantsGene:GSBRNA2T00104852001 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF13 | ProteinID:CDX97627 | ProteinID:CDX97627.1 |
| SEG:seg | UniParc:UPI0004EF3209 | MapMan:35.1 | : | : | : |
Description
BnaA05g24520D
Coordinates
chrLK031900:+:693862..695528
Molecular Weight (calculated)
30005.3 Da
IEP (calculated)
7.294
GRAVY (calculated)
-0.836
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNAAANAKP RRTAAKTRIS PSPPPPSQQQ QNQLQFGGFD GAAEHRGNGN ESSFLPPSMD SDSIADTIKS FFPVLMHSNY HHHHPPDLLS RTNSHNQDLR
101: LSLHSFPDGP PSLLHHHHSA SASTAEPVLF YGQSNPLGYD TSTGGWEQQS IQRLVAWNSG GATETGNGGG GFLFAPPAPS TTSFQPVLGQ SQLYSQRGPL
201: QSSYSPMIRA WFDPHHHHQS ISTDDLNHHI PHPVHQGEFS SGFRIPARFQ GQEEEQHDGF SNKPSSASSI SRHR
101: LSLHSFPDGP PSLLHHHHSA SASTAEPVLF YGQSNPLGYD TSTGGWEQQS IQRLVAWNSG GATETGNGGG GFLFAPPAPS TTSFQPVLGQ SQLYSQRGPL
201: QSSYSPMIRA WFDPHHHHQS ISTDDLNHHI PHPVHQGEFS SGFRIPARFQ GQEEEQHDGF SNKPSSASSI SRHR
001: MSDDQFHHPP PPSSMRHRST SDAADGGCGE IVEVQGGHIV RSTGRKDRHS KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GFDRPSKAVD WLIKKAKTSI
101: DELAELPPWN PADAIRLAAA NAKPRRTTAK TQISPSPPPP QQQQQQQQLQ FGVGFNGGGA EHPSNNESSF LPPSMDSDSI ADTIKSFFPV IGSSTEAPSN
201: HNLMHNYHHQ HPPDLLSRTN SQNQDLRLSL QSFPDGPPSL LHHQHHHHTS ASASEPTLFY GQSNPLGFDT SSWEQQSSEF GRIQRLVAWN SGGGGGATDT
301: GNGGGFLFAP PTPSTTSFQP VLGQSQQLYS QRGPLQSSYS PMIRAWFDPH HHHQSISTDD LNHHHHLPPP VHQSAIPGIG FASGEFSSGF RIPARFQGQE
401: EEQHDGLTHK PSSASSISRH
101: DELAELPPWN PADAIRLAAA NAKPRRTTAK TQISPSPPPP QQQQQQQQLQ FGVGFNGGGA EHPSNNESSF LPPSMDSDSI ADTIKSFFPV IGSSTEAPSN
201: HNLMHNYHHQ HPPDLLSRTN SQNQDLRLSL QSFPDGPPSL LHHQHHHHTS ASASEPTLFY GQSNPLGFDT SSWEQQSSEF GRIQRLVAWN SGGGGGATDT
301: GNGGGFLFAP PTPSTTSFQP VLGQSQQLYS QRGPLQSSYS PMIRAWFDPH HHHQSISTDD LNHHHHLPPP VHQSAIPGIG FASGEFSSGF RIPARFQGQE
401: EEQHDGLTHK PSSASSISRH
Arabidopsis Description
TCP4TCP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD44]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.