Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78321 | Canola | nucleus, plastid | 96.31 | 95.53 |
| Bra005967.1-P | Field mustard | nucleus, plastid | 95.49 | 94.72 |
| AT5G08070.1 | Thale cress | nucleus, plastid | 72.54 | 73.14 |
| CDY47005 | Canola | nucleus, plastid | 62.3 | 50.5 |
| CDY68618 | Canola | nucleus, plastid | 61.89 | 50.0 |
| CDY02180 | Canola | nucleus | 64.34 | 42.9 |
| CDY58696 | Canola | nucleus | 63.93 | 42.86 |
| PGSC0003DMT400063327 | Potato | nucleus, plastid | 37.3 | 26.45 |
| Solyc03g115010.1.1 | Tomato | plastid | 36.48 | 26.1 |
| CDX91977 | Canola | nucleus | 30.74 | 23.44 |
| CDX74272 | Canola | nucleus | 30.74 | 23.44 |
| GSMUA_Achr6P27420_001 | Banana | nucleus | 28.69 | 23.41 |
| GSMUA_Achr4P32850_001 | Banana | nucleus | 32.79 | 23.32 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 31.56 | 19.4 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 31.97 | 18.18 |
| CDX99891 | Canola | nucleus | 23.36 | 17.98 |
| CDY26285 | Canola | nucleus | 23.36 | 17.92 |
| CDY01537 | Canola | nucleus | 21.72 | 17.26 |
| CDY59229 | Canola | nucleus | 21.72 | 16.93 |
| CDX90234 | Canola | nucleus | 21.31 | 16.88 |
| CDY20097 | Canola | nucleus | 23.77 | 16.25 |
| CDY68596 | Canola | cytosol, nucleus | 24.59 | 15.54 |
| CDX75802 | Canola | nucleus | 25.0 | 15.1 |
| CDX82453 | Canola | nucleus | 25.0 | 15.06 |
| CDY02519 | Canola | nucleus | 20.9 | 14.83 |
| CDY60877 | Canola | nucleus | 21.31 | 14.53 |
| CDY10772 | Canola | nucleus | 19.26 | 13.58 |
| CDY10771 | Canola | nucleus | 19.26 | 13.54 |
| CDY24724 | Canola | nucleus | 19.26 | 13.51 |
| CDY55633 | Canola | nucleus | 20.9 | 13.35 |
| CDX95517 | Canola | nucleus | 13.93 | 12.01 |
| CDY18525 | Canola | nucleus | 13.93 | 12.01 |
| CDY12633 | Canola | nucleus | 15.57 | 11.8 |
| CDX96104 | Canola | nucleus | 16.8 | 11.68 |
| CDY01793 | Canola | nucleus | 16.8 | 11.61 |
| CDY33597 | Canola | nucleus | 15.16 | 11.46 |
| CDY46042 | Canola | nucleus | 15.98 | 11.27 |
| CDY07432 | Canola | nucleus | 15.98 | 11.08 |
| CDY45852 | Canola | nucleus | 14.75 | 10.84 |
| CDY28898 | Canola | nucleus | 15.57 | 10.73 |
| CDX81550 | Canola | nucleus | 14.75 | 10.65 |
| CDY62798 | Canola | nucleus | 14.75 | 8.76 |
| CDY52898 | Canola | nucleus | 15.16 | 8.71 |
| CDX82339 | Canola | nucleus | 14.75 | 8.49 |
| CDX97627 | Canola | mitochondrion | 5.33 | 4.74 |
| CDX78849 | Canola | nucleus, plastid | 2.87 | 2.93 |
Protein Annotations
| EnsemblPlants:CDX81083 | EnsemblPlantsGene:GSBRNA2T00134526001 | InterPro:IPR017887 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | PANTHER:PTHR31072 |
| PANTHER:PTHR31072:SF5 | PFAM:PF03634 | PFscan:PS51369 | ProteinID:CDX81083 | ProteinID:CDX81083.1 | SEG:seg |
| UniParc:UPI0004EF2078 | MapMan:15.5.19 | : | : | : | : |
Description
BnaC03g03370D
Coordinates
chrLK031823:+:1617980..1619144
Molecular Weight (calculated)
27342.8 Da
IEP (calculated)
6.912
GRAVY (calculated)
-0.611
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTNSMGIKQ EGDNHYQATS LSSLRQNPRI VRASRIFGGK DRHSKVCTVR GLRDRRIRLS ATTAIQLYDL QERLGLSQPS KVIDWLLEAA QNDVAMLPPL
101: QFPPGFHPNL TAAAGESFPG YFESFDLGSC SSRTDTTLQR EGLNLESHGF DIDHHFFSNS NHRDKLYFPS SSSCHYNLEQ LQQSLLDQSG NVTVALSNNN
201: HLNPSAVETM SSLFPRYPLF HEGGDQLQLF SSNSNSSKQT DHVE
101: QFPPGFHPNL TAAAGESFPG YFESFDLGSC SSRTDTTLQR EGLNLESHGF DIDHHFFSNS NHRDKLYFPS SSSCHYNLEQ LQQSLLDQSG NVTVALSNNN
201: HLNPSAVETM SSLFPRYPLF HEGGDQLQLF SSNSNSSKQT DHVE
001: MGIKKEDQKS SLSLLTQRWN NPRIVRVSRA FGGKDRHSKV CTVRGLRDRR IRLSVMTAIQ VYDLQERLGL SQPSKVIDWL LEVAKNDVDL LPPLQFPPGF
101: HQLNPNLTGL GESFPGVFDL GRTQREALDL EKRKWVNLDH VFDHIDHHNH FSNSIQSNKL YFPTITSSSS SYHYNLGHLQ QSLLDQSGNV TVAFSNNYNN
201: NNLNPPAAET MSSLFPTRYP SFLGGGQLQL FSSTSSQPDH IE
101: HQLNPNLTGL GESFPGVFDL GRTQREALDL EKRKWVNLDH VFDHIDHHNH FSNSIQSNKL YFPTITSSSS SYHYNLGHLQ QSLLDQSGNV TVAFSNNYNN
201: NNLNPPAAET MSSLFPTRYP SFLGGGQLQL FSSTSSQPDH IE
Arabidopsis Description
TCP17Transcription factor TCP17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LEZ9]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.