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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • cytosol 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g069460.1.1 Tomato plastid 27.7 34.17
GSMUA_Achr6P27420_001 Banana nucleus 28.86 33.11
CDX81083 Canola nucleus, plastid 23.32 32.79
AT5G08070.1 Thale cress nucleus, plastid 23.03 32.64
CDX78321 Canola nucleus, plastid 23.03 32.11
Bra005967.1-P Field mustard nucleus, plastid 23.03 32.11
PGSC0003DMT400063327 Potato nucleus, plastid 32.07 31.98
Solyc03g115010.1.1 Tomato plastid 31.49 31.67
KRH63215 Soybean nucleus, plastid 35.57 31.52
PGSC0003DMT400010453 Potato nucleus, plastid 27.99 31.48
CDY68618 Canola nucleus, plastid 27.7 31.46
CDY47005 Canola nucleus, plastid 27.41 31.23
Bra029344.1-P Field mustard nucleus, plastid 27.11 30.9
KRH54711 Soybean plastid 34.99 30.77
CDY02180 Canola nucleus 31.2 29.23
CDY58696 Canola nucleus 30.9 29.12
Bra012990.1-P Field mustard nucleus 30.9 28.96
KRH56798 Soybean nucleus 32.07 28.13
AT5G60970.1 Thale cress nucleus 29.45 28.06
KRH03150 Soybean nucleus, plastid 31.78 28.02
GSMUA_Achr10P... Banana nucleus 16.91 23.29
GSMUA_Achr8P19990_001 Banana nucleus 16.33 23.24
GSMUA_Achr6P14430_001 Banana nucleus 16.04 22.92
GSMUA_Achr3P31370_001 Banana nucleus 15.45 20.31
GSMUA_Achr4P31520_001 Banana nucleus 22.16 20.0
GSMUA_Achr2P12990_001 Banana nucleus 21.87 19.84
GSMUA_Achr5P02530_001 Banana nucleus 21.87 19.63
GSMUA_Achr10P... Banana nucleus 14.87 19.25
GSMUA_Achr7P01160_001 Banana nucleus 21.28 19.11
GSMUA_Achr4P22960_001 Banana nucleus 21.28 19.11
GSMUA_Achr7P13980_001 Banana nucleus 17.78 16.58
GSMUA_Achr2P21050_001 Banana mitochondrion 12.24 16.09
GSMUA_Achr3P03540_001 Banana nucleus 16.62 14.18
GSMUA_Achr5P06660_001 Banana mitochondrion, plastid 18.95 13.8
GSMUA_Achr10P... Banana cytosol, nucleus, peroxisome 13.12 13.64
GSMUA_Achr2P22480_001 Banana cytosol 12.24 12.96
Protein Annotations
MapMan:15.5.19GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr4G32850_001EnsemblPlants:GSMUA_Achr4P32850_001
EnsemblPlants:GSMUA_Achr4T32850_001InterPro:IPR017887UniProt:M0SU47PFAM:PF03634PFscan:PS51369PANTHER:PTHR31072
PANTHER:PTHR31072:SF5InterPro:TF_TCP_subgrInterPro:Transcription_factor_TCPUniParc:UPI000296CE65SEG:seg:
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G32850_001]
Coordinates
chr4:+:29500965..29501996
Molecular Weight (calculated)
37187.3 Da
IEP (calculated)
9.164
GRAVY (calculated)
-0.576
Length
343 amino acids
Sequence
(BLAST)
001: MINRSREKEK ATRQEGATSD GKFPVSSRPW LGLRNPRIVR VSRAFGGKDR HSKVSTIRGL RDRRVRLSVP TAIQLYDLQD KLGVDQPSKA VDWLLAAAQH
101: EIDKLPPLPF PPASFTQLGQ SFPISTAFSY HHPITSQGLA LTLHDKDVKC ADETGDCPLA LFSSAAENDG VLGNKAAELA KFPGFSLSSS VRTDVTTRQV
201: IGEGKNDDNV RSYCAQVSEA CDNSLTGSGS NLIPHASHYY HSNPANSNAY EHQFGGNSSS PPSVPGSQLV FYASGGTPPM FPTYMTPPNG SSSRQSIHIP
301: SAASQDLRSS CETFLRSGSH VSVRPSQQRS SSGVHRPFDR HEN
Best Arabidopsis Sequence Match ( AT3G02150.2 )
(BLAST)
001: MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI SSSSSSWMKS KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM
Arabidopsis Description
TCP13Transcription factor TCP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7W5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.