Factsheet for Solyc03g115010.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 4
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	golgi
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063327	Potato	nucleus, plastid	91.2	90.41
Solyc02g065800.1.1	Tomato	cytosol, plastid	20.53	49.3
Solyc06g069460.1.1	Tomato	plastid	36.66	44.96
Solyc02g089020.1.1	Tomato	nucleus, plastid	31.38	37.68
CDX81083	Canola	nucleus, plastid	26.1	36.48
AT5G08070.1	Thale cress	nucleus, plastid	25.81	36.36
Bra005967.1-P	Field mustard	nucleus, plastid	25.81	35.77
CDX78321	Canola	nucleus, plastid	25.81	35.77
KRH54711	Soybean	plastid	40.76	35.64
KRH63215	Soybean	nucleus, plastid	40.18	35.4
KRH03150	Soybean	nucleus, plastid	38.12	33.42
Bra029344.1-P	Field mustard	nucleus, plastid	29.03	32.89
CDY47005	Canola	nucleus, plastid	29.03	32.89
CDY68618	Canola	nucleus, plastid	29.03	32.78
AT5G60970.1	Thale cress	nucleus	34.02	32.22
CDY02180	Canola	nucleus	34.31	31.97
Bra012990.1-P	Field mustard	nucleus	34.31	31.97
CDY58696	Canola	nucleus	34.02	31.87
GSMUA_Achr4P32850_001	Banana	nucleus	31.67	31.49
KRH56798	Soybean	nucleus	36.07	31.46
GSMUA_Achr6P27420_001	Banana	nucleus	26.98	30.77
Solyc10g018710.1.1	Tomato	nucleus	13.49	26.9
Solyc05g012840.1.1	Tomato	nucleus	15.25	23.32
Solyc05g032780.1.1	Tomato	nucleus	13.78	22.17
Solyc11g045640.1.1	Tomato	nucleus	14.08	21.92
Solyc07g053410.2.1	Tomato	cytosol	14.96	20.9
Solyc08g048370.2.1	Tomato	cytosol	19.65	20.55
Solyc08g048390.1.1	Tomato	nucleus	20.82	18.35
Solyc03g045030.1.1	Tomato	nucleus	9.38	17.49
Solyc07g062680.1.1	Tomato	nucleus	19.94	17.0
Solyc12g014140.1.1	Tomato	nucleus	19.35	16.75
Solyc02g077250.2.1	Tomato	nucleus	17.01	16.38
Solyc02g089830.1.1	Tomato	cytosol, nucleus, plastid	9.97	14.11
Solyc03g119770.2.1	Tomato	nucleus	13.2	13.01
Solyc05g009900.1.1	Tomato	nucleus	11.44	11.05
Solyc04g006980.1.1	Tomato	nucleus	11.73	10.67
Solyc06g069240.1.1	Tomato	nucleus	12.61	10.59
Solyc10g008780.1.1	Tomato	nucleus	16.13	9.45

Protein Annotations

MapMan:15.5.19	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	UniProt:K4BL03
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF24	EnsemblPlantsGene:Solyc03g115010.1	EnsemblPlants:Solyc03g115010.1.1
InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI00027685B3	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:-:64866814..64867839

Molecular Weight (calculated)

38664.0 Da

IEP (calculated)

5.846

GRAVY (calculated)

-0.986

Length

341 amino acids

Sequence
(BLAST)

001: MNSSSGNNFE TKQESNNDSR LASKTTSAPP SSTSRQWGAN KNPRIVRVSR TFGGKDRHSK VCTIRGLRDR RIRLSVPTAI QLYDLQDRLG LSQPSKVVDW
101: LLEATKLDID TLPPLPVPPE YFTRFQQPSH EEFSDVRAQW LNANTSYLEH GRNKSIASNE ESNQEDNMFT LGNQRSSNLP GMPFNSYNYQ WDHQPNSNLS
201: LGHFGHNHSF SSQIDDDQSH QNTSFPLSLG SSSSPFPSSS QLYFNPITTT FQPIVPSPNY ITNHHPIESH DPRANMNHFN FLSSTTSHNN QLVMPTLNLI
301: SSQMKPFSLN NDPRWMSSRD DEDDDDDDDD DDNQPHEGRA I

Best Arabidopsis Sequence Match ( AT3G02150.2 )
(BLAST)

001: MNIVSWKDAN DEVAGGATTR REREVKEDQE ETEVRATSGK TVIKKQPTSI SSSSSSWMKS KDPRIVRVSR AFGGKDRHSK VCTLRGLRDR RVRLSVPTAI
101: QLYDLQERLG VDQPSKAVDW LLDAAKEEID ELPPLPISPE NFSIFNHHQS FLNLGQRPGQ DPTQLGFKIN GCVQKSTTTS REENDREKGE NDVVYTNNHH
201: VGSYGTYHNL EHHHHHHQHL SLQADYHSHQ LHSLVPFPSQ ILVCPMTTSP TTTTIQSLFP SSSSAGSGTM ETLDPRQMVS HFQMPLMGNS SSSSSQNIST
301: LYSLLHGSSS NNGGRDIDNR MSSVQFNRTN STTTANMSRH LGSERCTSRG SDHHM

Arabidopsis Description

TCP13Transcription factor TCP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7W5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.