CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03150	Soybean	nucleus, plastid	85.68	86.12
KRH63215	Soybean	nucleus, plastid	48.85	49.35
KRH54711	Soybean	plastid	49.1	49.23
Solyc03g115010.1.1	Tomato	plastid	31.46	36.07
KRH45058	Soybean	nucleus	32.48	35.77
PGSC0003DMT400063327	Potato	nucleus, plastid	30.43	34.59
KRH01308	Soybean	cytosol	32.48	33.07
KRG93654	Soybean	nucleus	31.2	32.62
GSMUA_Achr6P27420_001	Banana	nucleus	24.55	32.11
GSMUA_Achr4P32850_001	Banana	nucleus	28.13	32.07
KRH25697	Soybean	nucleus	15.86	21.31
KRH22307	Soybean	nucleus	17.9	20.35
KRH27017	Soybean	nucleus	17.39	19.83
KRH55819	Soybean	nucleus	16.11	18.92
KRH27317	Soybean	nucleus	17.9	18.57
KRH55125	Soybean	nucleus	18.41	18.41
KRH21998	Soybean	nucleus	17.65	17.56
KRH26201	Soybean	nucleus	17.39	17.13
KRH42567	Soybean	nucleus	19.95	16.67
KRH58674	Soybean	nucleus	19.69	16.11
KRH11155	Soybean	nucleus	18.93	14.48
KRH56692	Soybean	nucleus	13.55	14.1
KRH21093	Soybean	nucleus	18.93	13.91
KRH03810	Soybean	nucleus	13.3	13.68
KRH63057	Soybean	nucleus	13.3	13.51
KRH54810	Soybean	nucleus	13.3	13.13
KRH01497	Soybean	plastid	11.76	12.43
KRH45185	Soybean	plastid	11.51	12.16
KRH18263	Soybean	plastid	11.51	10.74
KRH35497	Soybean	nucleus	10.23	10.53
KRG91334	Soybean	nucleus	9.97	10.4
KRG93829	Soybean	nucleus, plastid	11.0	10.34

Protein Annotations

EntrezGene:102665855	MapMan:15.5.19	EMBL:ACUP02002797	EnsemblPlantsGene:GLYMA_05G019900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR017887	UniProt:K7KME0	EnsemblPlants:KRH56798	ProteinID:KRH56798	ProteinID:KRH56798.1
PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072	PANTHER:PTHR31072:SF24	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI00023C0389	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1779847..1782008

Molecular Weight (calculated)

43199.0 Da

IEP (calculated)

10.118

GRAVY (calculated)

-0.754

Length

391 amino acids

Sequence
(BLAST)

001: MMIESSGKVH EAKNQQEGDD DNNIKIEKLL KARPSTSSSS RSWSAFRNPR IVRVSRSLGS KDRHSKVCTI RGLRDRRIRL SVPTAIQLYN LQDKLGFNQP
101: SKVVDWLLEA TKSDIDKLPP LQFPHCFAHQ FHQQTLLPGT SQFSLGGFYD AANNNSTFIK DGGNQNRLTA TKSTRYWDID SLNNGKELAE SVSISQKGQF
201: WIKTNEQENH QGGGIGGSST TTHNREDNSS VHYKLFPIGT TTNNSYLPGL LNNGMTHNSY HHSEPSRLSL SHFGSHGLFP SHDSHQSSGI GVPFSSSNFS
301: GASSGPQLLF CPTSATPSAF YSVESDPRQS NNNVQIFSSS SQVMKRLPLI QSLHSTNSPI SRRLPTSFSS KLLDSDNNDR SQPNKGTSSR S

Best Arabidopsis Sequence Match ( AT5G60970.1 )
(BLAST)

001: MRSGECDEEE IQAKQERDQN QNHQVNLNHM LQQQQPSSVS SSRQWTSAFR NPRIVRVSRT FGGKDRHSKV CTVRGLRDRR IRLSVPTAIQ LYDLQDRLGL
101: SQPSKVIDWL LEAAKDDVDK LPPLQFPHGF NQMYPNLIFG NSGFGESPSS TTSTTFPGTN LGFLENWDLG GSSRTRARLT DTTTTQRESF DLDKGKWIKN
201: DENSNQDHQG FNTNHQQQFP LTNPYNNTSA YYNLGHLQQS LDQSGNNVTV AISNVAANNN NNLNLHPPSS SAGDGSQLFF GPTPPAMSSL FPTYPSFLGA
301: SHHHHVVDGA GHLQLFSSNS NTASQQHMMP GNTSLIRPFH HLMSSNHDTD HHSSDNESDS

Arabidopsis Description

TCP5Transcription factor TCP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FME3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.