Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30210.1 | KRH10202 | AT4G14700.1 | 18818695 |
| AT1G30210.1 | KRH23133 | AT4G14700.1 | 18818695 |
| AT1G30210.1 | KRG95533 | AT5G13060.1 | 18818695 |
| AT1G30210.1 | KRH67208 | AT5G13060.1 | 18818695 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58674 | Soybean | nucleus | 85.04 | 83.26 |
| VIT_10s0003g03910.t01 | Wine grape | nucleus | 53.85 | 56.76 |
| KRH11155 | Soybean | nucleus | 58.33 | 53.42 |
| KRH21093 | Soybean | nucleus | 59.19 | 52.07 |
| CDX99891 | Canola | nucleus | 35.26 | 52.05 |
| Bra032365.1-P | Field mustard | nucleus | 35.04 | 51.57 |
| CDY26285 | Canola | nucleus | 35.04 | 51.57 |
| AT1G30210.1 | Thale cress | nucleus | 34.19 | 49.38 |
| Bra010789.1-P | Field mustard | nucleus | 32.48 | 49.35 |
| CDX90234 | Canola | nucleus | 32.48 | 49.35 |
| CDY59229 | Canola | nucleus | 32.91 | 49.2 |
| GSMUA_Achr2P12990_001 | Banana | nucleus | 38.46 | 47.62 |
| GSMUA_Achr7P01160_001 | Banana | nucleus | 38.03 | 46.6 |
| PGSC0003DMT400051253 | Potato | nucleus | 33.97 | 46.49 |
| GSMUA_Achr4P31520_001 | Banana | nucleus | 37.39 | 46.05 |
| Solyc08g048390.1.1 | Tomato | nucleus | 37.82 | 45.74 |
| OQU89064 | Sorghum | cytosol | 7.69 | 45.0 |
| GSMUA_Achr5P02530_001 | Banana | nucleus | 36.32 | 44.5 |
| GSMUA_Achr4P22960_001 | Banana | nucleus | 35.9 | 43.98 |
| HORVU2Hr1G060120.1 | Barley | nucleus | 37.82 | 42.96 |
| TraesCS2D01G252100.1 | Wheat | nucleus | 37.61 | 42.31 |
| Os03t0785800-01 | Rice | nucleus | 32.05 | 42.02 |
| Solyc08g048370.2.1 | Tomato | cytosol | 28.85 | 41.41 |
| TraesCS2B01G265800.1 | Wheat | nucleus | 37.18 | 41.04 |
| Os07t0152000-01 | Rice | nucleus | 38.03 | 40.0 |
| KXG37409 | Sorghum | cytosol | 33.12 | 39.85 |
| Zm00001d013119_P001 | Maize | cytosol, nucleus, plastid | 32.05 | 39.37 |
| Zm00001d018806_P001 | Maize | nucleus | 35.9 | 38.44 |
| TraesCS5B01G032000.1 | Wheat | nucleus | 24.57 | 38.33 |
| TraesCS5D01G040100.1 | Wheat | nucleus | 23.93 | 37.97 |
| Zm00001d007868_P001 | Maize | nucleus | 35.68 | 37.95 |
| HORVU5Hr1G008340.2 | Barley | nucleus | 23.72 | 37.63 |
| Zm00001d034353_P001 | Maize | cytosol | 30.98 | 37.56 |
| EES16387 | Sorghum | cytosol, nucleus, plastid | 24.15 | 37.42 |
| TraesCS5A01G031900.1 | Wheat | nucleus | 23.72 | 37.37 |
| EER95875 | Sorghum | cytosol, nucleus, peroxisome | 36.75 | 37.31 |
| HORVU5Hr1G103400.1 | Barley | nucleus | 30.98 | 36.25 |
| Zm00001d022256_P001 | Maize | nucleus | 25.0 | 36.22 |
| TraesCS5A01G423900.1 | Wheat | cytosol | 30.98 | 35.8 |
| TraesCS5B01G426200.1 | Wheat | nucleus | 30.77 | 35.64 |
| TraesCS5D01G432500.1 | Wheat | nucleus | 30.34 | 35.41 |
| TraesCS2A01G251100.1 | Wheat | plastid, vacuole | 37.61 | 32.12 |
| Os12t0616400-01 | Rice | cytosol, nucleus, peroxisome | 12.61 | 28.37 |
| KRH27017 | Soybean | nucleus | 19.02 | 25.95 |
| KRH22307 | Soybean | nucleus | 18.59 | 25.29 |
| KRH26201 | Soybean | nucleus | 20.73 | 24.43 |
| KRH55125 | Soybean | nucleus | 20.3 | 24.3 |
| KRH25697 | Soybean | nucleus | 14.74 | 23.71 |
| KRH27317 | Soybean | nucleus | 18.8 | 23.34 |
| KRH45058 | Soybean | nucleus | 17.31 | 22.82 |
| KRG93654 | Soybean | nucleus | 17.95 | 22.46 |
| KRH55819 | Soybean | nucleus | 15.6 | 21.92 |
| KRH21998 | Soybean | nucleus | 18.38 | 21.88 |
| KRH54711 | Soybean | plastid | 18.16 | 21.79 |
| KRH63215 | Soybean | nucleus, plastid | 17.95 | 21.71 |
| KRH01308 | Soybean | cytosol | 17.73 | 21.61 |
| KRH03150 | Soybean | nucleus, plastid | 16.67 | 20.05 |
| KRH56798 | Soybean | nucleus | 16.67 | 19.95 |
| KRH63057 | Soybean | nucleus | 13.46 | 16.36 |
| KRH03810 | Soybean | nucleus | 13.03 | 16.05 |
| KRH56692 | Soybean | nucleus | 12.82 | 15.96 |
| KRH01497 | Soybean | plastid | 12.61 | 15.95 |
| KRH45185 | Soybean | plastid | 12.39 | 15.68 |
| KRH54810 | Soybean | nucleus | 13.25 | 15.66 |
| KRH18263 | Soybean | plastid | 13.68 | 15.27 |
| KRG93829 | Soybean | nucleus, plastid | 13.46 | 15.14 |
| KRH35497 | Soybean | nucleus | 11.54 | 14.21 |
| KRG91334 | Soybean | nucleus | 11.11 | 13.87 |
Protein Annotations
| EntrezGene:100802134 | MapMan:15.5.19 | EMBL:ACUP02004816 | InterPro:CYC/TB1_R_domain | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G097900 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1KRV6 | InterPro:IPR017887 | InterPro:IPR017888 |
| EnsemblPlants:KRH42567 | ProteinID:KRH42567 | ProteinID:KRH42567.1 | PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF2 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI0002338B12 | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:-:7488802..7493873
Molecular Weight (calculated)
51563.9 Da
IEP (calculated)
7.976
GRAVY (calculated)
-0.901
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEDEILQA RACKLPRRRG SDGESTNSRF HSSSWHHHNS SRIIRVSRAS GGKDRHSKVM TSKGLRDRRV RLSVNTAIQF YDLQDRLGYD QPSKAVEWLI
101: KSASDAISEL PSLNNFPDTP QSDDHEKREN TADVAVGVVD GENGNGQNLS LAKSACSSNS ETSKGSGLSL SRSDIRVKAR ERARERTTKE KEKEKEKNDE
201: SHRHHHNVVV VPHHNHNVNL VSQTASFTEL LTGSDPNKGC DEANNNMMFN KAAGRLQWCS STTPMDYFLG LSSSRTTTHN HNHLHHHQYS SSSSSGFSLA
301: QIQLGHSLPE AMNHVSAFNN NVSGDNHNHS SSDPHLQQQH LSLIPDHLMS AVVTSSAASS HHHHHHQPSG NDYNLNSTMS SGLAGYNRGT LQSNSPSLLP
401: HSQRFSPIDG STVPFFIGAA SSAAAVAAPA MENNNNNNHH QHQFSSVFDG SRLQLYYGHS DQKGKAKN
101: KSASDAISEL PSLNNFPDTP QSDDHEKREN TADVAVGVVD GENGNGQNLS LAKSACSSNS ETSKGSGLSL SRSDIRVKAR ERARERTTKE KEKEKEKNDE
201: SHRHHHNVVV VPHHNHNVNL VSQTASFTEL LTGSDPNKGC DEANNNMMFN KAAGRLQWCS STTPMDYFLG LSSSRTTTHN HNHLHHHQYS SSSSSGFSLA
301: QIQLGHSLPE AMNHVSAFNN NVSGDNHNHS SSDPHLQQQH LSLIPDHLMS AVVTSSAASS HHHHHHQPSG NDYNLNSTMS SGLAGYNRGT LQSNSPSLLP
401: HSQRFSPIDG STVPFFIGAA SSAAAVAAPA MENNNNNNHH QHQFSSVFDG SRLQLYYGHS DQKGKAKN
001: MIGDLMKNNN NGDVVDNEVN NRLSRWHHNS SRIIRVSRAS GGKDRHSKVL TSKGPRDRRV RLSVSTALQF YDLQDRLGYD QPSKAVEWLI KAAEDSISEL
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
Arabidopsis Description
TCP2Transcription factor TCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.