Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30210.1 | KRH10202 | AT4G14700.1 | 18818695 |
| AT1G30210.1 | KRH23133 | AT4G14700.1 | 18818695 |
| AT1G30210.1 | KRG95533 | AT5G13060.1 | 18818695 |
| AT1G30210.1 | KRH67208 | AT5G13060.1 | 18818695 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21093 | Soybean | nucleus | 91.39 | 87.78 |
| VIT_10s0003g03910.t01 | Wine grape | nucleus | 57.93 | 66.67 |
| KRH58674 | Soybean | nucleus | 54.99 | 58.79 |
| KRH42567 | Soybean | nucleus | 53.42 | 58.33 |
| CDX99891 | Canola | nucleus | 33.46 | 53.94 |
| PGSC0003DMT400051253 | Potato | nucleus | 36.01 | 53.8 |
| Bra032365.1-P | Field mustard | nucleus | 33.27 | 53.46 |
| CDY26285 | Canola | nucleus | 33.27 | 53.46 |
| Solyc08g048390.1.1 | Tomato | nucleus | 39.92 | 52.71 |
| AT1G30210.1 | Thale cress | nucleus | 32.88 | 51.85 |
| Bra010789.1-P | Field mustard | nucleus | 30.72 | 50.97 |
| CDX90234 | Canola | nucleus | 30.72 | 50.97 |
| CDY59229 | Canola | nucleus | 31.12 | 50.8 |
| GSMUA_Achr7P01160_001 | Banana | nucleus | 37.57 | 50.26 |
| GSMUA_Achr4P31520_001 | Banana | nucleus | 37.18 | 50.0 |
| OQU89064 | Sorghum | cytosol | 7.83 | 50.0 |
| GSMUA_Achr2P12990_001 | Banana | nucleus | 36.79 | 49.74 |
| GSMUA_Achr4P22960_001 | Banana | nucleus | 36.2 | 48.43 |
| GSMUA_Achr5P02530_001 | Banana | nucleus | 36.01 | 48.17 |
| Solyc08g048370.2.1 | Tomato | cytosol | 29.75 | 46.63 |
| HORVU2Hr1G060120.1 | Barley | nucleus | 36.4 | 45.15 |
| TraesCS2D01G252100.1 | Wheat | nucleus | 36.4 | 44.71 |
| TraesCS2B01G265800.1 | Wheat | nucleus | 36.4 | 43.87 |
| Os07t0152000-01 | Rice | nucleus | 37.96 | 43.6 |
| Os03t0785800-01 | Rice | nucleus | 29.55 | 42.3 |
| Zm00001d018806_P001 | Maize | nucleus | 35.62 | 41.65 |
| Zm00001d007868_P001 | Maize | nucleus | 35.81 | 41.59 |
| Zm00001d013119_P001 | Maize | cytosol, nucleus, plastid | 30.33 | 40.68 |
| Zm00001d034353_P001 | Maize | cytosol | 30.72 | 40.67 |
| KXG37409 | Sorghum | cytosol | 30.92 | 40.62 |
| EER95875 | Sorghum | cytosol, nucleus, peroxisome | 36.4 | 40.35 |
| TraesCS5B01G032000.1 | Wheat | nucleus | 23.09 | 39.33 |
| TraesCS5D01G040100.1 | Wheat | nucleus | 22.7 | 39.32 |
| EES16387 | Sorghum | cytosol, nucleus, plastid | 23.09 | 39.07 |
| HORVU5Hr1G008340.2 | Barley | nucleus | 22.5 | 38.98 |
| TraesCS5A01G031900.1 | Wheat | nucleus | 22.5 | 38.72 |
| HORVU5Hr1G103400.1 | Barley | nucleus | 29.75 | 38.0 |
| TraesCS5D01G432500.1 | Wheat | nucleus | 29.16 | 37.16 |
| Zm00001d022256_P001 | Maize | nucleus | 23.48 | 37.15 |
| TraesCS5B01G426200.1 | Wheat | nucleus | 28.96 | 36.63 |
| TraesCS5A01G423900.1 | Wheat | cytosol | 28.96 | 36.54 |
| TraesCS2A01G251100.1 | Wheat | plastid, vacuole | 36.4 | 33.94 |
| Os12t0616400-01 | Rice | cytosol, nucleus, peroxisome | 11.74 | 28.85 |
| KRH27017 | Soybean | nucleus | 17.61 | 26.24 |
| KRH22307 | Soybean | nucleus | 17.61 | 26.16 |
| KRH55125 | Soybean | nucleus | 18.98 | 24.81 |
| KRH26201 | Soybean | nucleus | 19.18 | 24.69 |
| KRH25697 | Soybean | nucleus | 13.89 | 24.4 |
| KRH45058 | Soybean | nucleus | 16.24 | 23.38 |
| KRH27317 | Soybean | nucleus | 17.22 | 23.34 |
| KRG93654 | Soybean | nucleus | 17.03 | 23.26 |
| KRH21998 | Soybean | nucleus | 17.42 | 22.65 |
| KRH55819 | Soybean | nucleus | 14.68 | 22.52 |
| KRH01308 | Soybean | cytosol | 16.83 | 22.4 |
| KRH54711 | Soybean | plastid | 15.85 | 20.77 |
| KRH63215 | Soybean | nucleus, plastid | 15.66 | 20.67 |
| KRH03150 | Soybean | nucleus, plastid | 14.48 | 19.02 |
| KRH56798 | Soybean | nucleus | 14.48 | 18.93 |
| KRH63057 | Soybean | nucleus | 12.92 | 17.14 |
| KRH01497 | Soybean | plastid | 12.33 | 17.03 |
| KRH56692 | Soybean | nucleus | 12.52 | 17.02 |
| KRH03810 | Soybean | nucleus | 12.52 | 16.84 |
| KRG93829 | Soybean | nucleus, plastid | 13.7 | 16.83 |
| KRH45185 | Soybean | plastid | 12.13 | 16.76 |
| KRH54810 | Soybean | nucleus | 12.92 | 16.67 |
| KRH18263 | Soybean | plastid | 13.5 | 16.47 |
| KRH35497 | Soybean | nucleus | 10.96 | 14.74 |
| KRG91334 | Soybean | nucleus | 10.57 | 14.4 |
Protein Annotations
| EntrezGene:100806032 | MapMan:15.5.19 | EMBL:ACUP02009186 | InterPro:CYC/TB1_R_domain | ncoils:Coil | EnsemblPlantsGene:GLYMA_15G092500 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | InterPro:IPR017888 | UniProt:K7MAH5 |
| EnsemblPlants:KRH11155 | ProteinID:KRH11155 | ProteinID:KRH11155.1 | PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF2 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI000233BBAB | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:+:7156448..7167239
Molecular Weight (calculated)
56030.6 Da
IEP (calculated)
7.126
GRAVY (calculated)
-1.012
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDEIQACK FPRVGNGRSS DQYQEEEEEG DLRRKGVGGG GGSDASTNHF HQSSWHYSSR IIRVSRASGG KDRHSKVMTS KGLRDRRVRL SVTTAIQFYD
101: LQDRLGYDQP SKAVEWLIKA ASEAISELPS LNNPFPDTPK QPSDEKRPTS GGGQQQQQQG FDDADGDTNY QQNQSQNLSL SKSACSSTSE TSKGSGLSLS
201: RSEIRVNRVK ARERARERAA KEKEKEKEKE SDFNIAHHHH HHNVNNMSHT ASFTELLTGG IGSTVTVNPN TTTTTTTTAT SPNGSSVHQI HEGHDHEANL
301: FNKGSQQQQQ QQHHHWSQTV TPMDYFSAGL LVGPSSSAST QQHQSSGQFQ LGHGHAHAHA LSISPFSGEN HSEQMQHFSF MPDHLNNMPS SAASASQHSE
401: GDNNNYNLNF SISSSGLAGY NRGTLQSNSP SSSFLPLLQR FQPLVDGSSN LPFFIGAAPP SSAPPTMDNN NSNNSNNHHH LQFSPIFDGR LQLCYGDGTR
501: QHSDHKGKGK N
101: LQDRLGYDQP SKAVEWLIKA ASEAISELPS LNNPFPDTPK QPSDEKRPTS GGGQQQQQQG FDDADGDTNY QQNQSQNLSL SKSACSSTSE TSKGSGLSLS
201: RSEIRVNRVK ARERARERAA KEKEKEKEKE SDFNIAHHHH HHNVNNMSHT ASFTELLTGG IGSTVTVNPN TTTTTTTTAT SPNGSSVHQI HEGHDHEANL
301: FNKGSQQQQQ QQHHHWSQTV TPMDYFSAGL LVGPSSSAST QQHQSSGQFQ LGHGHAHAHA LSISPFSGEN HSEQMQHFSF MPDHLNNMPS SAASASQHSE
401: GDNNNYNLNF SISSSGLAGY NRGTLQSNSP SSSFLPLLQR FQPLVDGSSN LPFFIGAAPP SSAPPTMDNN NSNNSNNHHH LQFSPIFDGR LQLCYGDGTR
501: QHSDHKGKGK N
001: MIGDLMKNNN NGDVVDNEVN NRLSRWHHNS SRIIRVSRAS GGKDRHSKVL TSKGPRDRRV RLSVSTALQF YDLQDRLGYD QPSKAVEWLI KAAEDSISEL
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
Arabidopsis Description
TCP2Transcription factor TCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.