Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH63057 | Soybean | nucleus | 86.87 | 89.35 |
| KRH56692 | Soybean | nucleus | 50.0 | 52.66 |
| KRH03810 | Soybean | nucleus | 48.99 | 51.05 |
| VIT_17s0000g04180.t01 | Wine grape | nucleus | 30.81 | 33.33 |
| PGSC0003DMT400010380 | Potato | nucleus | 21.97 | 31.18 |
| Solyc03g119770.2.1 | Tomato | nucleus | 25.25 | 28.9 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 17.68 | 26.52 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 18.18 | 26.37 |
| CDX95517 | Canola | nucleus | 18.69 | 26.15 |
| CDY18525 | Canola | nucleus | 18.69 | 26.15 |
| Bra037579.1-P | Field mustard | nucleus | 18.69 | 25.96 |
| PGSC0003DMT400014572 | Potato | nucleus | 23.99 | 25.13 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 18.43 | 24.75 |
| KRH01497 | Soybean | plastid | 22.47 | 24.05 |
| KRH45185 | Soybean | plastid | 22.22 | 23.78 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 17.68 | 23.57 |
| Solyc06g069240.1.1 | Tomato | nucleus | 23.23 | 22.66 |
| KRH18263 | Soybean | plastid | 23.48 | 22.2 |
| KRG91334 | Soybean | nucleus | 20.96 | 22.13 |
| KRG93829 | Soybean | nucleus, plastid | 23.23 | 22.12 |
| KRH35497 | Soybean | nucleus | 21.21 | 22.11 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 18.43 | 20.62 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 18.18 | 20.45 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 17.93 | 20.17 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 17.93 | 19.89 |
| Os03t0706500-01 | Rice | nucleus | 18.94 | 19.33 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 18.43 | 19.21 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 17.42 | 18.85 |
| Zm00001d013467_P001 | Maize | nucleus | 16.92 | 18.66 |
| CDY52898 | Canola | nucleus | 19.95 | 18.59 |
| AT3G18550.3 | Thale cress | nucleus | 20.2 | 18.43 |
| CDX82339 | Canola | nucleus | 19.7 | 18.4 |
| Bra001710.1-P | Field mustard | nucleus | 19.7 | 18.35 |
| CDY62798 | Canola | nucleus | 18.43 | 17.76 |
| KRH27017 | Soybean | nucleus | 14.39 | 16.62 |
| KRH22307 | Soybean | nucleus | 14.14 | 16.28 |
| KRH25697 | Soybean | nucleus | 11.62 | 15.81 |
| KRG93654 | Soybean | nucleus | 13.38 | 14.17 |
| KRH58674 | Soybean | nucleus | 16.67 | 13.81 |
| KRH45058 | Soybean | nucleus | 12.37 | 13.8 |
| KRH55125 | Soybean | nucleus | 13.38 | 13.55 |
| KRH27317 | Soybean | nucleus | 12.88 | 13.53 |
| KRH55819 | Soybean | nucleus | 11.36 | 13.51 |
| KRH26201 | Soybean | nucleus | 13.38 | 13.35 |
| KRH56798 | Soybean | nucleus | 13.13 | 13.3 |
| KRH42567 | Soybean | nucleus | 15.66 | 13.25 |
| KRH03150 | Soybean | nucleus, plastid | 12.88 | 13.11 |
| KRH01308 | Soybean | cytosol | 12.63 | 13.02 |
| KRH11155 | Soybean | nucleus | 16.67 | 12.92 |
| KRH21998 | Soybean | nucleus | 12.63 | 12.72 |
| KRH21093 | Soybean | nucleus | 16.67 | 12.41 |
| KRH54711 | Soybean | plastid | 12.12 | 12.31 |
| KRH63215 | Soybean | nucleus, plastid | 11.62 | 11.89 |
Protein Annotations
| EntrezGene:100798555 | MapMan:15.5.19 | EMBL:ACUP02003585 | InterPro:CYC/TB1_R_domain | ncoils:Coil | EnsemblPlantsGene:GLYMA_06G210600 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | InterPro:IPR017888 | UniProt:K7KWC8 |
| EnsemblPlants:KRH54810 | ProteinID:KRH54810 | ProteinID:KRH54810.1 | PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 |
| PANTHER:PTHR31072 | PANTHER:PTHR31072:SF41 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP | UniParc:UPI00029555A7 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:20867161..20869455
Molecular Weight (calculated)
46013.2 Da
IEP (calculated)
6.386
GRAVY (calculated)
-1.073
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSQSSDTFP SHNRNDPISY YDPAFYYYNS RPFFIDSESN PTSKQENNNN NCDLVPSPPP PLSFFHFPSP TFEDTQNQIF LEQRHDFLLQ FYHQPLPQDP
101: EPQPVITTMD LSVKKSDQIQ RKRVPGKRDR HSKINTARGL RDRRMRLSLE VAKRFFGLQD MLNFDKASKT VEWLLNQAKV EINRLVKEKQ KQQQQKKKEE
201: NDHHYYQSCS SASSECDQEG VSCLDEVVVS GDQEQQQERV EKVVKRKVKN SRKISAFDPL AKECRERARE RARERTREKM RNRGVLAEES KQCGEETNQD
301: LIQLGSWNPF ETGDQESAGA KRTTTHSVAE HPSSLDVITI EAKEQSYHAA KEHDDDDDDS LVVLSKWSPS LIFNNYGFSQ DHQFAEFQSL GKLWEA
101: EPQPVITTMD LSVKKSDQIQ RKRVPGKRDR HSKINTARGL RDRRMRLSLE VAKRFFGLQD MLNFDKASKT VEWLLNQAKV EINRLVKEKQ KQQQQKKKEE
201: NDHHYYQSCS SASSECDQEG VSCLDEVVVS GDQEQQQERV EKVVKRKVKN SRKISAFDPL AKECRERARE RARERTREKM RNRGVLAEES KQCGEETNQD
301: LIQLGSWNPF ETGDQESAGA KRTTTHSVAE HPSSLDVITI EAKEQSYHAA KEHDDDDDDS LVVLSKWSPS LIFNNYGFSQ DHQFAEFQSL GKLWEA
001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY
Arabidopsis Description
BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.