Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g069240.1.1 | Tomato | nucleus | 84.23 | 57.88 |
| PGSC0003DMT400014572 | Potato | nucleus | 36.92 | 27.25 |
| VIT_17s0000g04180.t01 | Wine grape | nucleus | 35.48 | 27.05 |
| PGSC0003DMT400008673 | Potato | nucleus | 14.7 | 26.11 |
| PGSC0003DMT400026037 | Potato | cytosol, nucleus, plastid | 21.86 | 25.63 |
| CDX95517 | Canola | nucleus | 25.09 | 24.73 |
| CDY18525 | Canola | nucleus | 25.09 | 24.73 |
| Bra037579.1-P | Field mustard | nucleus | 25.09 | 24.56 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 22.22 | 23.48 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 22.94 | 23.44 |
| KRH03810 | Soybean | nucleus | 31.18 | 22.89 |
| KRH63057 | Soybean | nucleus | 31.18 | 22.6 |
| KRH56692 | Soybean | nucleus | 30.11 | 22.34 |
| KRH54810 | Soybean | nucleus | 31.18 | 21.97 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 22.94 | 21.69 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 22.94 | 21.55 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 26.16 | 20.74 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 25.81 | 20.45 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 25.45 | 20.06 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 25.45 | 19.89 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 25.81 | 19.67 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 25.81 | 18.95 |
| Zm00001d013467_P001 | Maize | nucleus | 24.37 | 18.94 |
| Os03t0706500-01 | Rice | nucleus | 25.81 | 18.56 |
| PGSC0003DMT400019324 | Potato | nucleus | 25.09 | 18.37 |
| CDX82339 | Canola | nucleus | 25.81 | 16.98 |
| PGSC0003DMT400068332 | Potato | cytosol, nucleus, peroxisome, plastid | 13.26 | 16.97 |
| Bra001710.1-P | Field mustard | nucleus | 25.81 | 16.94 |
| CDY62798 | Canola | nucleus | 24.73 | 16.79 |
| CDY52898 | Canola | nucleus | 25.09 | 16.47 |
| AT3G18550.3 | Thale cress | nucleus | 25.09 | 16.13 |
| PGSC0003DMT400002153 | Potato | nucleus | 20.43 | 16.1 |
| PGSC0003DMT400051253 | Potato | nucleus | 18.28 | 14.91 |
| PGSC0003DMT400003453 | Potato | nucleus, plastid | 14.34 | 14.13 |
| PGSC0003DMT400024329 | Potato | nucleus | 15.41 | 13.83 |
| PGSC0003DMT400032269 | Potato | nucleus | 17.92 | 12.5 |
| PGSC0003DMT400010453 | Potato | nucleus, plastid | 12.9 | 11.8 |
| PGSC0003DMT400059117 | Potato | nucleus | 13.98 | 11.68 |
| PGSC0003DMT400063327 | Potato | nucleus, plastid | 13.62 | 11.05 |
| PGSC0003DMT400039786 | Potato | nucleus | 16.49 | 10.93 |
| PGSC0003DMT400068478 | Potato | nucleus | 15.05 | 8.06 |
Protein Annotations
| MapMan:15.5.19 | ProteinID:AEF98450 | ProteinID:AEF98450.1 | ProteinID:AEF98454 | ProteinID:AEF98454.1 | InterPro:CYC/TB1_R_domain |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EMBL:HM597228 | EMBL:HM921051 | InterPro:IPR017887 |
| InterPro:IPR017888 | UniProt:M0ZXY0 | PFAM:PF03634 | EnsemblPlantsGene:PGSC0003DMG400004054 | PGSC:PGSC0003DMG400004054 | EnsemblPlants:PGSC0003DMT400010380 |
| PFscan:PS51369 | PFscan:PS51370 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF41 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI0002968619 | SEG:seg | : | : | : | : |
Description
TCP protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004054]
Coordinates
chr6:+:50994183..50995911
Molecular Weight (calculated)
31123.2 Da
IEP (calculated)
10.105
GRAVY (calculated)
-1.015
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGRGGNKG DDVVMSSRIS IISGRISKNN KRSSNKDRHS KINTARGPRD RRMRLSLDAA RKFFRLQDLL GFDKASKTVE WLLTQSDSAI EELVAVKGND
101: AQVPQQTSCN TPTTTTGIGA ICASNSISES CEVISGTDET SSNDKNKETT AKDEKEKKKK PVNTARRPAF EPLTKESRNQ ARARARERTK TKKMSQVGKS
201: KSPAHDLNPS GSRRPANRTC EEPGTHEQHT FHHVDDSSFV VNGNWNPFTI FTSHEQYAGI SNEHQLVTDL QFYGKLWES
101: AQVPQQTSCN TPTTTTGIGA ICASNSISES CEVISGTDET SSNDKNKETT AKDEKEKKKK PVNTARRPAF EPLTKESRNQ ARARARERTK TKKMSQVGKS
201: KSPAHDLNPS GSRRPANRTC EEPGTHEQHT FHHVDDSSFV VNGNWNPFTI FTSHEQYAGI SNEHQLVTDL QFYGKLWES
001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRPVLGS MDTSSDLCEL ASMWTVDDRG SNTNTTETRG NKVDGRSMRG KRKRPEPRTP ILKKLSKEER AKARERAKGR
301: TMEKMMMKMK GRSQLVKVVE EDAHDHGEII KNNNRSQVNR SSFEMTHCED KIEELCKNDR FAVCNEFIMN KKDHISNESY DLVNYKPNSS FPVINHHRSQ
401: GAANSIEQHQ FTDLHYSFGA KPRDLMHNYQ NMY
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRPVLGS MDTSSDLCEL ASMWTVDDRG SNTNTTETRG NKVDGRSMRG KRKRPEPRTP ILKKLSKEER AKARERAKGR
301: TMEKMMMKMK GRSQLVKVVE EDAHDHGEII KNNNRSQVNR SSFEMTHCED KIEELCKNDR FAVCNEFIMN KKDHISNESY DLVNYKPNSS FPVINHHRSQ
401: GAANSIEQHQ FTDLHYSFGA KPRDLMHNYQ NMY
Arabidopsis Description
BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.