CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54810	Soybean	nucleus	89.35	86.87
KRH56692	Soybean	nucleus	51.95	53.19
KRH03810	Soybean	nucleus	50.91	51.58
VIT_17s0000g04180.t01	Wine grape	nucleus	32.99	34.7
PGSC0003DMT400010380	Potato	nucleus	22.6	31.18
Solyc03g119770.2.1	Tomato	nucleus	25.45	28.32
TraesCS5D01G002300.1	Wheat	nucleus	18.18	26.52
CDX95517	Canola	nucleus	19.48	26.5
CDY18525	Canola	nucleus	19.48	26.5
TraesCS5A01G001900.1	Wheat	nucleus	18.7	26.37
Bra037579.1-P	Field mustard	nucleus	19.48	26.32
TraesCS5B01G002300.1	Wheat	nucleus	18.96	24.75
PGSC0003DMT400014572	Potato	nucleus	24.16	24.6
HORVU5Hr1G000490.1	Barley	nucleus	18.18	23.57
Solyc06g069240.1.1	Tomato	nucleus	24.42	23.15
KRH01497	Soybean	plastid	22.08	22.97
KRH45185	Soybean	plastid	21.56	22.43
KRG91334	Soybean	nucleus	21.82	22.4
KRH35497	Soybean	nucleus	22.08	22.37
KRH18263	Soybean	plastid	24.16	22.2
KRG93829	Soybean	nucleus, plastid	23.64	21.88
TraesCS4B01G042700.1	Wheat	nucleus	19.22	20.9
TraesCS4A01G271300.1	Wheat	nucleus	18.96	20.74
TraesCS4D01G040100.1	Wheat	nucleus	18.7	20.45
HORVU4Hr1G007040.1	Barley	nucleus	18.7	20.17
EER93595	Sorghum	cytosol, nucleus, peroxisome, plastid	19.48	19.74
Os03t0706500-01	Rice	nucleus	19.74	19.59
CDX82339	Canola	nucleus	21.56	19.58
CDY52898	Canola	nucleus	21.56	19.53
Bra001710.1-P	Field mustard	nucleus	21.56	19.53
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	18.44	19.4
AT3G18550.3	Thale cress	nucleus	21.82	19.35
Zm00001d013467_P001	Maize	nucleus	17.92	19.22
CDY62798	Canola	nucleus	20.26	18.98
KRH27017	Soybean	nucleus	14.03	15.74
KRH22307	Soybean	nucleus	14.03	15.7
KRH25697	Soybean	nucleus	11.69	15.46
KRG93654	Soybean	nucleus	14.03	14.44
KRH45058	Soybean	nucleus	12.99	14.08
KRH58674	Soybean	nucleus	17.4	14.02
KRH55125	Soybean	nucleus	14.03	13.81
KRH27317	Soybean	nucleus	13.51	13.79
KRH26201	Soybean	nucleus	14.03	13.6
KRH42567	Soybean	nucleus	16.36	13.46
KRH56798	Soybean	nucleus	13.51	13.3
KRH01308	Soybean	cytosol	13.25	13.28
KRH55819	Soybean	nucleus	11.43	13.21
KRH03150	Soybean	nucleus, plastid	13.25	13.11
KRH21998	Soybean	nucleus	13.25	12.98
KRH11155	Soybean	nucleus	17.14	12.92
KRH54711	Soybean	plastid	12.99	12.82
KRH21093	Soybean	nucleus	17.14	12.41
KRH63215	Soybean	nucleus, plastid	12.47	12.4

Protein Annotations

EntrezGene:100784394	MapMan:15.5.19	EMBL:ACUP02002593	InterPro:CYC/TB1_R_domain	EnsemblPlantsGene:GLYMA_04G152400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR017887	InterPro:IPR017888	UniProt:K7KK45	EnsemblPlants:KRH63057
ProteinID:KRH63057	ProteinID:KRH63057.1	ProteinID:KRH63058.1	ProteinID:KRH63059.1	PFAM:PF03634	PFscan:PS51369
PFscan:PS51370	PANTHER:PTHR31072	PANTHER:PTHR31072:SF41	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI000233951A
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:34221031..34225294

Molecular Weight (calculated)

44177.1 Da

IEP (calculated)

6.753

GRAVY (calculated)

-1.036

Length

385 amino acids

Sequence
(BLAST)

001: MQSQSSDTFP SHNGNDPISC YDPAFYYYNS RPFSPIDSES NPTSKQDNNN NCDLVPSPTP LSFFHFPSSP FEDTQNQILL EQHHDFLLQF HHQSLPKDPV
101: PQPAVITTMD PFVKKSDQIQ RKRPGKRDRH SKINTARGLR DRRMRLSLEV AKRFFGLQDM LNFDKASKTV EWLLNQAKVE INRLVKEKKK NDHHHQSCSS
201: ASSECEEGVS SLDEVVVSRD QEQQQQQQQE KVEKVVKRRV KNSRKISAFD PLAKECRERA RERARERTRE KMRSRGVLAE ESKQCGEETN QDLIQLGSSN
301: PFETGDQESG AKTSHSVDVH PSSLDVIATE AKEQSYRAVK EHNDDDDDSL VVLSKWSPSL IFNNSGFSQD HQFAEFQSLG KPWET

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.