Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21998 | Soybean | nucleus | 87.8 | 84.22 |
| VIT_19s0014g01680.t01 | Wine grape | nucleus | 53.32 | 50.5 |
| KRH26201 | Soybean | nucleus | 53.05 | 50.38 |
| KRH55125 | Soybean | nucleus | 51.72 | 49.87 |
| KRH22307 | Soybean | nucleus | 42.71 | 46.8 |
| KRH27017 | Soybean | nucleus | 41.64 | 45.77 |
| KRH25697 | Soybean | nucleus | 34.22 | 44.33 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 48.81 | 40.89 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 48.81 | 40.53 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 48.81 | 40.26 |
| KRH55819 | Soybean | nucleus | 34.22 | 38.74 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 42.44 | 37.65 |
| Os01t0213800-01 | Rice | mitochondrion | 49.87 | 32.47 |
| Zm00001d039371_P001 | Maize | mitochondrion | 47.21 | 31.5 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 48.81 | 31.19 |
| KXG33398 | Sorghum | nucleus | 35.01 | 29.27 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 34.48 | 29.15 |
| Zm00001d043423_P001 | Maize | nucleus | 33.42 | 29.03 |
| OQU86111 | Sorghum | plastid | 47.48 | 28.55 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 12.47 | 21.86 |
| KRH54711 | Soybean | plastid | 20.16 | 19.49 |
| KRH63215 | Soybean | nucleus, plastid | 19.89 | 19.38 |
| KRG93654 | Soybean | nucleus | 18.83 | 18.98 |
| KRH42567 | Soybean | nucleus | 23.34 | 18.8 |
| Zm00001d012725_P002 | Maize | plastid | 34.48 | 18.62 |
| KRH58674 | Soybean | nucleus | 23.61 | 18.62 |
| KRH45058 | Soybean | nucleus | 17.51 | 18.59 |
| KRH03150 | Soybean | nucleus, plastid | 18.57 | 17.99 |
| KRH56798 | Soybean | nucleus | 18.57 | 17.9 |
| KRH11155 | Soybean | nucleus | 23.34 | 17.22 |
| KRH21093 | Soybean | nucleus | 23.61 | 16.73 |
| KRH01308 | Soybean | cytosol | 16.98 | 16.67 |
| KRH56692 | Soybean | nucleus | 14.85 | 14.89 |
| KRH03810 | Soybean | nucleus | 14.85 | 14.74 |
| KRH63057 | Soybean | nucleus | 13.79 | 13.51 |
| KRH01497 | Soybean | plastid | 12.73 | 12.97 |
| KRH45185 | Soybean | plastid | 12.73 | 12.97 |
| KRH54810 | Soybean | nucleus | 13.53 | 12.88 |
| KRG93829 | Soybean | nucleus, plastid | 13.53 | 12.26 |
| KRH18263 | Soybean | plastid | 13.53 | 12.17 |
| KRG91334 | Soybean | nucleus | 11.94 | 12.0 |
| KRH35497 | Soybean | nucleus | 11.67 | 11.58 |
Protein Annotations
| EntrezGene:100802063 | MapMan:15.5.19 | EMBL:ACUP02007798 | EnsemblPlantsGene:GLYMA_12G228300 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | UniProt:I1LV51 | InterPro:IPR017887 | EnsemblPlants:KRH27317 | ProteinID:KRH27317 | ProteinID:KRH27317.1 |
| PFAM:PF03634 | PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF13 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI000233CBBB | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:38813527..38816237
Molecular Weight (calculated)
39905.8 Da
IEP (calculated)
6.711
GRAVY (calculated)
-0.561
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRASGGGGG EIVEVEGGHI VRSTGRKDRH SKVCTAKGPR DRRVRLSAHT AIQFYDVQDR LGYDRPSKAV DWLINKAKSA IDQLAHLPPW KPTLPAPQND
101: DESDKLNPNP NPIPIHHPDA EILHQFNEND TENLRCDGGG GSSYLPMDND AIRSFFPTTT SSLVHFQSYP PDLLSRTSSQ DLRLSLQSLQ DPVLLHQNHH
201: NNEHVLFAGT GFENMVAWNS SSNNNNNTAS NDTCGGGGGG GGGGGGGGFV FNAPSTLTGP ATVASPAVVF GHGLGQGQYF TQRGPLQSSN SPSVRAWIDA
301: PSFVAAAADH RHHHHHYLSP AAAAAALVYQ SAPSTAAFAA APGGFSGFRV PAQIQGEEEH DGGVSDKPSS ASSDSHR
101: DESDKLNPNP NPIPIHHPDA EILHQFNEND TENLRCDGGG GSSYLPMDND AIRSFFPTTT SSLVHFQSYP PDLLSRTSSQ DLRLSLQSLQ DPVLLHQNHH
201: NNEHVLFAGT GFENMVAWNS SSNNNNNTAS NDTCGGGGGG GGGGGGGGFV FNAPSTLTGP ATVASPAVVF GHGLGQGQYF TQRGPLQSSN SPSVRAWIDA
301: PSFVAAAADH RHHHHHYLSP AAAAAALVYQ SAPSTAAFAA APGGFSGFRV PAQIQGEEEH DGGVSDKPSS ASSDSHR
001: MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
Arabidopsis Description
TCP3TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.