Factsheet for GSMUA_Achr2P21050_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P22480_001	Banana	cytosol	75.48	60.8
TraesCS5A01G001900.1	Wheat	nucleus	24.52	23.44
TraesCS5D01G002300.1	Wheat	nucleus	23.37	23.11
TraesCS5B01G002300.1	Wheat	nucleus	24.52	21.69
HORVU5Hr1G000490.1	Barley	nucleus	24.52	21.55
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	27.2	21.52
TraesCS4D01G040100.1	Wheat	nucleus	27.2	20.17
TraesCS4A01G271300.1	Wheat	nucleus	27.2	20.17
TraesCS4B01G042700.1	Wheat	nucleus	27.2	20.06
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	27.59	19.67
HORVU4Hr1G007040.1	Barley	nucleus	26.44	19.33
EER93595	Sorghum	cytosol, nucleus, peroxisome, plastid	27.59	18.95
Zm00001d013467_P001	Maize	nucleus	25.67	18.66
Os03t0706500-01	Rice	nucleus	26.05	17.53
GSMUA_Achr8P19990_001	Banana	nucleus	13.41	14.52
GSMUA_Achr10P...	Banana	nucleus	13.79	14.46
GSMUA_Achr10P...	Banana	nucleus	14.56	14.34
GSMUA_Achr6P14430_001	Banana	nucleus	13.03	14.17
GSMUA_Achr3P31370_001	Banana	nucleus	13.41	13.41
GSMUA_Achr4P32850_001	Banana	nucleus	16.09	12.24
GSMUA_Achr7P13980_001	Banana	nucleus	16.48	11.68
GSMUA_Achr7P01160_001	Banana	nucleus	16.48	11.26
GSMUA_Achr6P27420_001	Banana	nucleus	12.26	10.7
GSMUA_Achr4P22960_001	Banana	nucleus	15.33	10.47
GSMUA_Achr3P03540_001	Banana	nucleus	16.09	10.45
GSMUA_Achr2P12990_001	Banana	nucleus	14.94	10.32
GSMUA_Achr4P31520_001	Banana	nucleus	14.56	10.0
GSMUA_Achr5P02530_001	Banana	nucleus	14.18	9.69
GSMUA_Achr5P06660_001	Banana	mitochondrion, plastid	16.09	8.92

Protein Annotations

MapMan:15.5.19	InterPro:CYC/TB1_R_domain	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G21050_001
EnsemblPlants:GSMUA_Achr2P21050_001	EnsemblPlants:GSMUA_Achr2T21050_001	InterPro:IPR017887	InterPro:IPR017888	UniProt:M0S9U6	PFAM:PF03634
PFscan:PS51369	PFscan:PS51370	PANTHER:PTHR31072	PANTHER:PTHR31072:SF22	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP
UniParc:UPI000294A981	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G21050_001]

Coordinates

chr2:+:20709751..20710536

Molecular Weight (calculated)

29332.0 Da

IEP (calculated)

10.826

GRAVY (calculated)

-0.567

Length

261 amino acids

Sequence
(BLAST)

001: MWLQHLLGQA FLLVIQPHRW RGRKATTVGS RKRALRKCRH SKIVTANGPR DRRMRLSIDV ARSFFRLQDT FDFDKASKTV QWLLTVSKAA IEELGTLSSA
101: EHSGCSNRSP KSESSALVCQ DSSAISSSKN KSSTVTAAAR EVKKSKARKG GVKPSRKVEY HSALARESRA KARARARERT REKQRMTSLD IIKEETSLNN
201: MNSLMEFANI EEDESCAPNW CLNVASDTAA AYQVPVIPVF ENSGNEIMDS DLFVPWIRFR G

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.