Factsheet for GSMUA_Achr8P19990_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	74.69	72.29
GSMUA_Achr6P14430_001	Banana	nucleus	50.62	50.83
GSMUA_Achr7P13980_001	Banana	nucleus	71.37	46.74
GSMUA_Achr3P31370_001	Banana	nucleus	46.89	43.3
GSMUA_Achr3P03540_001	Banana	nucleus	69.71	41.79
GSMUA_Achr5P06660_001	Banana	mitochondrion, plastid	81.33	41.61
GSMUA_Achr10P...	Banana	nucleus	43.57	39.62
KRH26201	Soybean	nucleus	58.51	35.52
KRH55125	Soybean	nucleus	56.85	35.04
Solyc05g012840.1.1	Tomato	nucleus	32.37	34.98
VIT_19s0014g01680.t01	Wine grape	nucleus	57.68	34.92
Solyc10g018710.1.1	Tomato	nucleus	24.48	34.5
Solyc11g045640.1.1	Tomato	nucleus	25.73	28.31
Solyc05g032780.1.1	Tomato	nucleus	24.48	27.83
PGSC0003DMT400059117	Potato	nucleus	37.34	26.95
Solyc02g077250.2.1	Tomato	nucleus	37.76	25.71
GSMUA_Achr2P12990_001	Banana	nucleus	29.88	19.05
GSMUA_Achr4P31520_001	Banana	nucleus	29.46	18.68
GSMUA_Achr4P22960_001	Banana	nucleus	29.46	18.59
GSMUA_Achr7P01160_001	Banana	nucleus	29.05	18.32
GSMUA_Achr6P27420_001	Banana	nucleus	22.41	18.06
GSMUA_Achr5P02530_001	Banana	nucleus	27.8	17.54
GSMUA_Achr4P32850_001	Banana	nucleus	23.24	16.33
PGSC0003DMT400068478	Potato	nucleus	33.2	15.36
Solyc10g008780.1.1	Tomato	nucleus	33.61	13.92
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	18.67	13.64
GSMUA_Achr2P21050_001	Banana	mitochondrion	14.52	13.41
GSMUA_Achr2P22480_001	Banana	cytosol	15.77	11.73

Protein Annotations

MapMan:15.5.19	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G19990_001	EnsemblPlants:GSMUA_Achr8P19990_001
EnsemblPlants:GSMUA_Achr8T19990_001	InterPro:IPR017887	UniProt:M0TS02	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF66	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0002964D05	SEG:seg	:

Description

Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G19990_001]

Coordinates

chr8:+:25078703..25080439

Molecular Weight (calculated)

26286.9 Da

IEP (calculated)

10.563

GRAVY (calculated)

-0.661

Length

241 amino acids

Sequence
(BLAST)

001: MGEGHNHHSL GYNQLSLHHH HHQQQQLQRP QPRPRHGGGM RGGVIGEIVE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV RLAAHTAIQF YDVQDRLGYD
101: RPSKAVDWLI KNAKAAIDQL AELPPWSPSA TIVAAHAASS SPGWAEQGQR IAVPLHSVLG QSQFFCQRGP LQSSNSPAIR AWADPVDATT DHRMQPALHP
201: SISTIGFTSG AGFSGLRIPA RFQGEEEHDG ITSKPPSASR N

Best Arabidopsis Sequence Match ( AT1G53230.2 )
(BLAST)

001: MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H

Arabidopsis Description

TCP3TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.