Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013304.1-P | Field mustard | nucleus, plastid | 100.0 | 100.0 |
| CDY60877 | Canola | nucleus | 96.23 | 64.25 |
| CDY55633 | Canola | nucleus | 86.61 | 54.19 |
| CDY01537 | Canola | nucleus | 38.08 | 29.64 |
| CDX99891 | Canola | nucleus | 31.38 | 23.66 |
| CDY26285 | Canola | nucleus | 31.38 | 23.58 |
| CDX90234 | Canola | nucleus | 26.36 | 20.45 |
| GSMUA_Achr2P12990_001 | Banana | nucleus | 32.22 | 20.37 |
| CDY59229 | Canola | nucleus | 26.36 | 20.13 |
| GSMUA_Achr7P01160_001 | Banana | nucleus | 31.8 | 19.9 |
| HORVU2Hr1G060120.1 | Barley | nucleus | 33.89 | 19.66 |
| GSMUA_Achr4P31520_001 | Banana | nucleus | 30.96 | 19.47 |
| Os12t0616400-01 | Rice | cytosol, nucleus, peroxisome | 16.74 | 19.23 |
| TraesCS2D01G252100.1 | Wheat | nucleus | 33.47 | 19.23 |
| Os07t0152000-01 | Rice | nucleus | 35.56 | 19.1 |
| TraesCS2B01G265800.1 | Wheat | nucleus | 33.47 | 18.87 |
| GSMUA_Achr5P02530_001 | Banana | nucleus | 29.71 | 18.59 |
| Zm00001d018806_P001 | Maize | nucleus | 33.89 | 18.54 |
| Zm00001d007868_P001 | Maize | nucleus | 33.89 | 18.41 |
| Zm00001d034353_P001 | Maize | cytosol | 29.29 | 18.13 |
| GSMUA_Achr4P22960_001 | Banana | nucleus | 28.87 | 18.06 |
| Zm00001d013119_P001 | Maize | cytosol, nucleus, plastid | 28.45 | 17.85 |
| KXG37409 | Sorghum | cytosol | 28.45 | 17.48 |
| EER95875 | Sorghum | cytosol, nucleus, peroxisome | 33.47 | 17.35 |
| Os03t0785800-01 | Rice | nucleus | 24.69 | 16.53 |
| HORVU5Hr1G103400.1 | Barley | nucleus | 26.36 | 15.75 |
| TraesCS5D01G432500.1 | Wheat | nucleus | 25.94 | 15.46 |
| TraesCS5B01G426200.1 | Wheat | nucleus | 25.52 | 15.1 |
| TraesCS5A01G423900.1 | Wheat | cytosol | 25.52 | 15.06 |
| TraesCS2A01G251100.1 | Wheat | plastid, vacuole | 33.47 | 14.6 |
| EES16387 | Sorghum | cytosol, nucleus, plastid | 17.15 | 13.58 |
| Zm00001d022256_P001 | Maize | nucleus | 17.57 | 13.0 |
| HORVU5Hr1G008340.2 | Barley | nucleus | 15.9 | 12.88 |
| TraesCS5D01G040100.1 | Wheat | nucleus | 15.9 | 12.88 |
| TraesCS5B01G032000.1 | Wheat | nucleus | 15.9 | 12.67 |
| TraesCS5A01G031900.1 | Wheat | nucleus | 15.48 | 12.46 |
| CDX97627 | Canola | mitochondrion | 12.97 | 11.31 |
| CDX75802 | Canola | nucleus | 13.81 | 8.17 |
| CDX82453 | Canola | nucleus | 13.81 | 8.15 |
| CDY10772 | Canola | nucleus | 11.72 | 8.09 |
| CDY10771 | Canola | nucleus | 11.72 | 8.07 |
| CDY24724 | Canola | nucleus | 11.72 | 8.05 |
| CDY01793 | Canola | nucleus | 11.72 | 7.93 |
| CDY68596 | Canola | cytosol, nucleus | 11.72 | 7.25 |
| CDY02519 | Canola | nucleus | 10.04 | 6.98 |
| CDY20097 | Canola | nucleus | 10.04 | 6.72 |
| CDY46042 | Canola | nucleus | 9.62 | 6.65 |
| CDX96104 | Canola | nucleus | 9.62 | 6.55 |
| CDY07432 | Canola | nucleus | 9.62 | 6.53 |
| CDX95517 | Canola | nucleus | 7.53 | 6.36 |
| CDY18525 | Canola | nucleus | 7.53 | 6.36 |
| CDY28898 | Canola | nucleus | 9.21 | 6.21 |
| CDY12633 | Canola | nucleus | 8.37 | 6.21 |
| CDX91977 | Canola | nucleus | 7.53 | 5.62 |
| CDX74272 | Canola | nucleus | 7.53 | 5.62 |
| CDX81550 | Canola | nucleus | 7.53 | 5.33 |
| CDY33597 | Canola | nucleus | 7.11 | 5.26 |
| CDY45852 | Canola | nucleus | 7.11 | 5.12 |
| CDY52898 | Canola | nucleus | 7.53 | 4.24 |
| CDY62798 | Canola | nucleus | 7.11 | 4.14 |
| CDX82339 | Canola | nucleus | 7.11 | 4.01 |
| CDX81083 | Canola | nucleus, plastid | 2.93 | 2.87 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 5.02 | 2.8 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 4.18 | 2.52 |
| CDY02180 | Canola | nucleus | 3.77 | 2.46 |
| CDX78321 | Canola | nucleus, plastid | 2.51 | 2.44 |
| CDY58696 | Canola | nucleus | 3.35 | 2.2 |
| CDY47005 | Canola | nucleus, plastid | 2.51 | 1.99 |
| CDY68618 | Canola | nucleus, plastid | 2.09 | 1.66 |
| OQU89064 | Sorghum | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX78849 | EnsemblPlantsGene:GSBRNA2T00131324001 | InterPro:CYC/TB1_R_domain | InterPro:IPR017888 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF2 |
| PFscan:PS51370 | ProteinID:CDX78849 | ProteinID:CDX78849.1 | SEG:seg | UniParc:UPI0002546088 | MapMan:35.1 |
Description
BnaA01g09160D
Coordinates
chrLK031816:-:427767..428486
Molecular Weight (calculated)
25793.1 Da
IEP (calculated)
7.010
GRAVY (calculated)
-0.897
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDDENQNQT VTAAAAKSAC SSNSDTSKNS SGLSLSRSEL RDKARERARE RTAKETKERD HTGSFTDLLN SGSDPVNVNR QWMATSSSPA QMEYLTSGLI
101: LGSGQTHFPI QTSAHPFSDH HHHPQEFSFV PDHLISPAGS NGGGAFNLDF NMSSTTSAAG TAGFSGFNRG TLQSNSSNHH QQQSFLANLQ RFSSSEGGGG
201: PQFLFGALPA ENHHPNSHQF QLYYENGCRN SDQKGKGKN
101: LGSGQTHFPI QTSAHPFSDH HHHPQEFSFV PDHLISPAGS NGGGAFNLDF NMSSTTSAAG TAGFSGFNRG TLQSNSSNHH QQQSFLANLQ RFSSSEGGGG
201: PQFLFGALPA ENHHPNSHQF QLYYENGCRN SDQKGKGKN
001: MIGDLMKNNN NGDVVDNEVN NRLSRWHHNS SRIIRVSRAS GGKDRHSKVL TSKGPRDRRV RLSVSTALQF YDLQDRLGYD QPSKAVEWLI KAAEDSISEL
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
101: PSLNNTHFPT DDENHQNQTL TTVAANSLSK SACSSNSDTS KNSSGLSLSR SELRDKARER ARERTAKETK ERDHNHTSFT DLLNSGSDPV NSNRQWMASA
201: PSSSPMEYFS SGLILGSGQQ THFPISTNSH PFSSISDHHH HHPHHQHQEF SFVPDHLISP AESNGGAFNL DFNMSTPSGA GAAVSAASGG GFSGFNRGTL
301: QSNSTNQHQS FLANLQRFPT SESGGGPQFL FGALPAENHH HNHQFQLYYE NGCRNSSEHK GKGKN
Arabidopsis Description
TCP2Transcription factor TCP2 [Source:UniProtKB/Swiss-Prot;Acc:Q93V43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.