Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45852 | Canola | nucleus | 66.25 | 64.46 |
| CDX81550 | Canola | nucleus | 67.18 | 64.2 |
| AT1G68800.2 | Thale cress | nucleus | 68.73 | 61.33 |
| VIT_01s0011g02920.t01 | Wine grape | nucleus | 35.6 | 26.26 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 19.81 | 24.24 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 20.12 | 23.81 |
| Solyc04g006980.1.1 | Tomato | nucleus | 26.32 | 22.67 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 20.43 | 22.37 |
| PGSC0003DMT400019324 | Potato | nucleus | 26.32 | 22.31 |
| CDY18525 | Canola | nucleus | 18.89 | 21.55 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 19.81 | 21.55 |
| Solyc05g009900.1.1 | Tomato | nucleus | 23.22 | 21.25 |
| CDX95517 | Canola | nucleus | 18.58 | 21.2 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 21.36 | 20.91 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 22.6 | 20.62 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 22.29 | 20.45 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 22.29 | 20.45 |
| PGSC0003DMT400002153 | Potato | nucleus | 22.29 | 20.34 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 22.29 | 20.17 |
| CDY12633 | Canola | nucleus | 19.5 | 19.57 |
| CDY01793 | Canola | nucleus | 21.36 | 19.55 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 22.29 | 18.95 |
| Zm00001d013467_P001 | Maize | nucleus | 21.05 | 18.94 |
| CDX96104 | Canola | nucleus | 20.12 | 18.52 |
| CDY62798 | Canola | nucleus | 23.22 | 18.25 |
| CDY46042 | Canola | nucleus | 19.5 | 18.21 |
| Os03t0706500-01 | Rice | nucleus | 21.67 | 18.04 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 20.43 | 18.03 |
| CDY07432 | Canola | nucleus | 19.5 | 17.9 |
| CDY52898 | Canola | nucleus | 23.53 | 17.88 |
| CDY28898 | Canola | nucleus | 19.5 | 17.8 |
| CDX99891 | Canola | nucleus | 17.03 | 17.35 |
| CDY26285 | Canola | nucleus | 17.03 | 17.3 |
| CDX82339 | Canola | nucleus | 22.6 | 17.22 |
| CDX90234 | Canola | nucleus | 15.48 | 16.23 |
| CDY59229 | Canola | nucleus | 15.48 | 15.97 |
| CDX81083 | Canola | nucleus, plastid | 11.46 | 15.16 |
| CDX78321 | Canola | nucleus, plastid | 11.46 | 15.04 |
| CDY60877 | Canola | nucleus | 16.1 | 14.53 |
| CDY55633 | Canola | nucleus | 16.1 | 13.61 |
| CDY01537 | Canola | nucleus | 12.69 | 13.36 |
| CDY68618 | Canola | nucleus, plastid | 11.76 | 12.58 |
| CDY47005 | Canola | nucleus, plastid | 11.46 | 12.29 |
| CDY02519 | Canola | nucleus | 13.0 | 12.21 |
| CDY20097 | Canola | nucleus | 13.31 | 12.04 |
| CDY68596 | Canola | cytosol, nucleus | 14.24 | 11.92 |
| CDX75802 | Canola | nucleus | 14.55 | 11.63 |
| CDX82453 | Canola | nucleus | 14.55 | 11.6 |
| CDX74272 | Canola | nucleus | 11.46 | 11.56 |
| CDX91977 | Canola | nucleus | 11.46 | 11.56 |
| CDY10772 | Canola | nucleus | 12.38 | 11.56 |
| CDY10771 | Canola | nucleus | 12.38 | 11.53 |
| CDY24724 | Canola | nucleus | 12.38 | 11.49 |
| CDY02180 | Canola | nucleus | 12.69 | 11.2 |
| CDY58696 | Canola | nucleus | 12.38 | 10.99 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 11.15 | 9.07 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 11.15 | 8.39 |
| CDX78849 | Canola | nucleus, plastid | 5.26 | 7.11 |
| CDX97627 | Canola | mitochondrion | 2.48 | 2.92 |
Protein Annotations
| MapMan:15.5.19 | UniProt:A0A078H805 | EnsemblPlants:CDY33597 | ProteinID:CDY33597 | ProteinID:CDY33597.1 | InterPro:CYC/TB1_R_domain |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00054894001 | InterPro:IPR017887 | InterPro:IPR017888 |
| PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF22 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI0004EB3E71 | SEG:seg | : | : | : |
Description
BnaC06g29550DBnaC06g29550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H805]
Coordinates
chrLK032317:+:364735..365706
Molecular Weight (calculated)
36447.1 Da
IEP (calculated)
8.943
GRAVY (calculated)
-0.763
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPSLDTSGY DLFDPFNPHQ ATMLPFFTTP IQSPSSHHHY PLSSFPFSSD FLDESVLISS FLLAQQDAAT HVADCPRKLC KKLEDKCVGG TTLEKVPRRR
101: TGKKRDRHSK ICTAQGPRDR RMRLSQQIAR KFFNLQDMLG FDKASKTIEW LISQSKASIR KVKESVDASG GGEGDDEHLQ DNEKAKEETM KVSRRRTKTV
201: ENSCKKKESR EKARERARER TLTKMKMRIS GLIDTSKIFS DPIQESQKIE LTGGAQVEGK SPEQESSTTN VNMVEYQMDS VRTIEKFLGL NSDASSSSIF
301: GDSEESYASL SQLEVLLQKQ VTT
101: TGKKRDRHSK ICTAQGPRDR RMRLSQQIAR KFFNLQDMLG FDKASKTIEW LISQSKASIR KVKESVDASG GGEGDDEHLQ DNEKAKEETM KVSRRRTKTV
201: ENSCKKKESR EKARERARER TLTKMKMRIS GLIDTSKIFS DPIQESQKIE LTGGAQVEGK SPEQESSTTN VNMVEYQMDS VRTIEKFLGL NSDASSSSIF
301: GDSEESYASL SQLEVLLQKQ VTT
001: MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL YDYLCY
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGMSTPREH NTTSIATVDE EKSPISSFSL YDYLCY
Arabidopsis Description
BRC2TCP domain protein 12 [Source:TAIR;Acc:AT1G68800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.