Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038350.1-P | Field mustard | nucleus | 99.7 | 98.81 |
| CDX81550 | Canola | nucleus | 95.78 | 94.08 |
| AT1G68800.2 | Thale cress | nucleus | 73.19 | 67.13 |
| CDY33597 | Canola | nucleus | 64.46 | 66.25 |
| VIT_01s0011g02920.t01 | Wine grape | nucleus | 34.04 | 25.8 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 18.98 | 23.86 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 19.58 | 23.81 |
| Solyc04g006980.1.1 | Tomato | nucleus | 26.51 | 23.47 |
| PGSC0003DMT400019324 | Potato | nucleus | 26.51 | 23.1 |
| Solyc05g009900.1.1 | Tomato | nucleus | 24.4 | 22.95 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 19.88 | 22.37 |
| PGSC0003DMT400002153 | Potato | nucleus | 23.49 | 22.03 |
| CDY18525 | Canola | nucleus | 18.67 | 21.91 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 19.28 | 21.55 |
| CDX95517 | Canola | nucleus | 18.07 | 21.2 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 20.78 | 20.91 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 21.69 | 20.17 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 21.39 | 20.06 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 21.08 | 19.89 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 21.08 | 19.89 |
| CDY01793 | Canola | nucleus | 21.08 | 19.83 |
| CDX96104 | Canola | nucleus | 20.78 | 19.66 |
| CDY07432 | Canola | nucleus | 20.48 | 19.32 |
| CDY12633 | Canola | nucleus | 18.67 | 19.25 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 21.99 | 19.21 |
| CDY28898 | Canola | nucleus | 20.48 | 19.21 |
| Zm00001d013467_P001 | Maize | nucleus | 20.48 | 18.94 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 20.78 | 18.85 |
| CDY52898 | Canola | nucleus | 24.1 | 18.82 |
| Os03t0706500-01 | Rice | nucleus | 21.99 | 18.81 |
| CDY62798 | Canola | nucleus | 22.89 | 18.49 |
| CDX82339 | Canola | nucleus | 23.19 | 18.16 |
| CDY46042 | Canola | nucleus | 18.67 | 17.92 |
| CDX99891 | Canola | nucleus | 15.66 | 16.4 |
| CDY26285 | Canola | nucleus | 15.66 | 16.35 |
| CDX90234 | Canola | nucleus | 14.46 | 15.58 |
| CDY59229 | Canola | nucleus | 14.46 | 15.34 |
| CDX78321 | Canola | nucleus, plastid | 11.14 | 15.04 |
| CDX81083 | Canola | nucleus, plastid | 10.84 | 14.75 |
| CDY60877 | Canola | nucleus | 15.66 | 14.53 |
| CDY55633 | Canola | nucleus | 15.96 | 13.87 |
| CDY02519 | Canola | nucleus | 14.16 | 13.66 |
| CDY01537 | Canola | nucleus | 12.35 | 13.36 |
| CDY68618 | Canola | nucleus, plastid | 12.05 | 13.24 |
| CDY47005 | Canola | nucleus, plastid | 11.45 | 12.62 |
| CDY20097 | Canola | nucleus | 13.55 | 12.61 |
| CDY68596 | Canola | cytosol, nucleus | 14.16 | 12.18 |
| CDX75802 | Canola | nucleus | 14.46 | 11.88 |
| CDX91977 | Canola | nucleus | 11.45 | 11.88 |
| CDX74272 | Canola | nucleus | 11.45 | 11.88 |
| CDX82453 | Canola | nucleus | 14.46 | 11.85 |
| CDY10772 | Canola | nucleus | 12.05 | 11.56 |
| CDY10771 | Canola | nucleus | 12.05 | 11.53 |
| CDY24724 | Canola | nucleus | 12.05 | 11.49 |
| CDY02180 | Canola | nucleus | 12.35 | 11.2 |
| CDY58696 | Canola | nucleus | 12.05 | 10.99 |
| CDY60475 | Canola | endoplasmic reticulum, golgi | 11.14 | 9.32 |
| CDY43255 | Canola | endoplasmic reticulum, golgi | 11.14 | 8.62 |
| CDX78849 | Canola | nucleus, plastid | 5.12 | 7.11 |
| CDX97627 | Canola | mitochondrion | 2.41 | 2.92 |
Protein Annotations
| MapMan:15.5.19 | UniProt:A0A078I6V2 | EnsemblPlants:CDY45852 | ProteinID:CDY45852 | ProteinID:CDY45852.1 | InterPro:CYC/TB1_R_domain |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00082802001 | InterPro:IPR017887 | InterPro:IPR017888 |
| PFAM:PF03634 | PFscan:PS51369 | PFscan:PS51370 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF22 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI0004EDC72A | SEG:seg | : | : | : |
Description
BnaA02g14010DBnaA02g14010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6V2]
Coordinates
chrLK032638:+:169747..170849
Molecular Weight (calculated)
37888.5 Da
IEP (calculated)
9.044
GRAVY (calculated)
-0.867
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPSIDTNGY DLFDPFNLHE ATMLPSFTTH ILSPSSHHHY PFPSSSDFLD ESVLISQFLL QQQADVDSPR KLRRELEQEK KNEEWVDGTT SEKVSPRRTG
101: KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLI SKSKASIKQV KESAAASGNH EHLQVSDNVN DETQKVSKGR TKRVDDSCKK
201: KQSREKARER ARERTMTKMK MRLSGLIDTS KTFADPNQVS RKTKIIGGAQ ERENLEQERS IIEKFLGLTS ESSSSTIFGD SEESYTSLGS IRETVSTTGM
301: VIPREHNTTS TASVDEERNP ISTFSLYDYL CY
101: KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLI SKSKASIKQV KESAAASGNH EHLQVSDNVN DETQKVSKGR TKRVDDSCKK
201: KQSREKARER ARERTMTKMK MRLSGLIDTS KTFADPNQVS RKTKIIGGAQ ERENLEQERS IIEKFLGLTS ESSSSTIFGD SEESYTSLGS IRETVSTTGM
301: VIPREHNTTS TASVDEERNP ISTFSLYDYL CY
001: MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGTISAAGM STPREHNTTS IATVDEEKSP ISSFSLYDYL CY
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGTISAAGM STPREHNTTS IATVDEEKSP ISSFSLYDYL CY
Arabidopsis Description
BRC2TCP domain protein 12 [Source:TAIR;Acc:AT1G68800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.