Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45852 | Canola | nucleus | 98.81 | 99.7 |
| CDX81550 | Canola | nucleus | 96.12 | 95.27 |
| AT1G68800.2 | Thale cress | nucleus | 73.43 | 67.96 |
| VIT_01s0011g02920.t01 | Wine grape | nucleus | 33.73 | 25.8 |
| TraesCS5D01G002300.1 | Wheat | nucleus | 18.81 | 23.86 |
| TraesCS5A01G001900.1 | Wheat | nucleus | 19.4 | 23.81 |
| Solyc04g006980.1.1 | Tomato | nucleus | 26.57 | 23.73 |
| PGSC0003DMT400019324 | Potato | nucleus | 26.57 | 23.36 |
| Solyc05g009900.1.1 | Tomato | nucleus | 24.48 | 23.23 |
| TraesCS5B01G002300.1 | Wheat | nucleus | 19.7 | 22.37 |
| PGSC0003DMT400002153 | Potato | nucleus | 23.58 | 22.32 |
| HORVU5Hr1G000490.1 | Barley | nucleus | 19.1 | 21.55 |
| Bra037579.1-P | Field mustard | nucleus | 18.21 | 21.4 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, peroxisome | 20.6 | 20.91 |
| HORVU4Hr1G007040.1 | Barley | nucleus | 21.49 | 20.17 |
| TraesCS4B01G042700.1 | Wheat | nucleus | 21.19 | 20.06 |
| Bra004212.1-P | Field mustard | nucleus | 20.3 | 19.94 |
| TraesCS4A01G271300.1 | Wheat | nucleus | 20.9 | 19.89 |
| TraesCS4D01G040100.1 | Wheat | nucleus | 20.9 | 19.89 |
| EER93595 | Sorghum | cytosol, nucleus, peroxisome, plastid | 21.79 | 19.21 |
| Bra004097.1-P | Field mustard | nucleus | 19.7 | 19.02 |
| Zm00001d013467_P001 | Maize | nucleus | 20.3 | 18.94 |
| Zm00001d033673_P001 | Maize | cytosol, nucleus, peroxisome, plastid | 20.6 | 18.85 |
| Os03t0706500-01 | Rice | nucleus | 21.79 | 18.81 |
| Bra034010.1-P | Field mustard | nucleus | 18.51 | 17.92 |
| Bra001710.1-P | Field mustard | nucleus | 22.69 | 17.88 |
| Bra032365.1-P | Field mustard | nucleus | 15.52 | 16.35 |
| Bra010789.1-P | Field mustard | nucleus | 14.33 | 15.58 |
| Bra005967.1-P | Field mustard | nucleus, plastid | 10.75 | 14.63 |
| Bra012600.1-P | Field mustard | nucleus | 16.42 | 14.4 |
| Bra030952.1-P | Field mustard | nucleus | 14.03 | 13.62 |
| Bra021586.1-P | Field mustard | nucleus | 13.73 | 13.14 |
| Bra029344.1-P | Field mustard | nucleus, plastid | 11.64 | 12.96 |
| Bra027284.1-P | Field mustard | nucleus | 14.63 | 12.07 |
| Bra039158.1-P | Field mustard | nucleus | 11.04 | 11.97 |
| Bra001579.1-P | Field mustard | nucleus | 14.33 | 11.79 |
| Bra018280.1-P | Field mustard | nucleus | 11.94 | 11.46 |
| Bra012990.1-P | Field mustard | nucleus | 12.24 | 11.2 |
| Bra001032.1-P | Field mustard | nucleus | 11.94 | 7.43 |
| Bra013304.1-P | Field mustard | nucleus, plastid | 5.07 | 7.11 |
Protein Annotations
| MapMan:15.5.19 | EnsemblPlantsGene:Bra038350 | EnsemblPlants:Bra038350.1 | EnsemblPlants:Bra038350.1-P | InterPro:CYC/TB1_R_domain | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR017887 | InterPro:IPR017888 | UniProt:M4FB84 | PFAM:PF03634 |
| PFscan:PS51369 | PFscan:PS51370 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF22 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI00025464A0 | SEG:seg | : | : | : | : |
Description
AT1G68800 (E=2e-082) BRC2, TCP12 | TCP12 (TCP DOMAIN PROTEIN 12); transcription factor
Coordinates
chrA02:-:11068775..11069886
Molecular Weight (calculated)
38249.8 Da
IEP (calculated)
8.764
GRAVY (calculated)
-0.881
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPSIDTNGY DLFDPFNLHE ATMLPSFTTH ILSPSSHHHY PFPSFPSSSD FLDESVLISQ FLLQQQADVD SPRKLRRELE QEKKNEEWVD GTTSEKVSPR
101: RTGKKRDRHS KICTAQGPRD RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLISKSKASI KQVKESAAAS GNHEHLQVSD NVNDETQKVS KGRTKRVDDS
201: CKKKQSREKA RERARERTMT KMKMRLSGLI DTSKTFADPN QESRKTKIIG GAQERENLEQ ERSIIEKFLG LTSESSSSTI FGDSEESYTS LGSIRETVST
301: TGMVIPREHN TTSTASVDEE RNPISTFSLY DYLCY
101: RTGKKRDRHS KICTAQGPRD RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLISKSKASI KQVKESAAAS GNHEHLQVSD NVNDETQKVS KGRTKRVDDS
201: CKKKQSREKA RERARERTMT KMKMRLSGLI DTSKTFADPN QESRKTKIIG GAQERENLEQ ERSIIEKFLG LTSESSSSTI FGDSEESYTS LGSIRETVST
301: TGMVIPREHN TTSTASVDEE RNPISTFSLY DYLCY
001: MFPSLDTNGY DLFDPFIPHQ TTMFPSFITH IQSPNSHHHY SSPSFPFSSD FLESFDESFL INQFLLQQQD VAANVVESPW KFCKKLELKK KNEKCVDGST
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGTISAAGM STPREHNTTS IATVDEEKSP ISSFSLYDYL CY
101: SQEVQWRRTV KKRDRHSKIC TAQGPRDRRM RLSLQIARKF FDLQDMLGFD KASKTIEWLF SKSKTSIKQL KERVAASEGG GKDEHLQVDE KEKDETLKLR
201: VSKRRTKTME SSFKTKESRE RARKRARERT MAKMKMRLFE TSETISDPHQ ETREIKITNG VQLLEKENKE QEWSNTNDVH MVEYQMDSVS IIEKFLGLTS
301: DSSSSSIFGD SEECYTSLSS VRGTISAAGM STPREHNTTS IATVDEEKSP ISSFSLYDYL CY
Arabidopsis Description
BRC2TCP domain protein 12 [Source:TAIR;Acc:AT1G68800]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.