Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018280.1-P | Field mustard | nucleus | 82.55 | 85.39 |
| CDY10772 | Canola | nucleus | 81.72 | 85.26 |
| CDY10771 | Canola | nucleus | 81.44 | 84.73 |
| CDY24724 | Canola | nucleus | 81.44 | 84.48 |
| KRH22307 | Soybean | nucleus | 41.55 | 43.6 |
| KRH27017 | Soybean | nucleus | 41.27 | 43.44 |
| KRH25697 | Soybean | nucleus | 32.13 | 39.86 |
| Solyc07g053410.2.1 | Tomato | cytosol | 26.87 | 39.75 |
| PGSC0003DMT400024329 | Potato | nucleus | 31.86 | 36.98 |
| KRH55819 | Soybean | nucleus | 33.24 | 36.04 |
| AT1G53230.1 | Thale cress | nucleus | 37.4 | 34.53 |
| AT3G15030.1 | Thale cress | nucleus | 37.4 | 32.14 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 35.46 | 30.12 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 36.84 | 29.56 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 36.84 | 29.3 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 36.84 | 29.1 |
| Zm00001d039371_P001 | Maize | mitochondrion | 37.67 | 24.07 |
| Os01t0213800-01 | Rice | mitochondrion | 37.67 | 23.49 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 37.12 | 22.71 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 27.42 | 22.2 |
| OQU86111 | Sorghum | plastid | 38.5 | 22.17 |
| KXG33398 | Sorghum | nucleus | 27.42 | 21.95 |
| AT1G30210.1 | Thale cress | nucleus | 19.67 | 21.91 |
| AT5G08070.1 | Thale cress | nucleus, plastid | 14.68 | 21.9 |
| Zm00001d043423_P001 | Maize | nucleus | 26.04 | 21.66 |
| AT4G18390.1 | Thale cress | nucleus | 20.78 | 20.55 |
| AT3G02150.2 | Thale cress | nucleus | 17.73 | 18.03 |
| AT5G60970.1 | Thale cress | nucleus | 15.51 | 15.56 |
| AT1G67260.1 | Thale cress | nucleus | 14.13 | 14.21 |
| Zm00001d012725_P002 | Maize | plastid | 26.59 | 13.75 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 8.03 | 13.49 |
| AT1G68800.2 | Thale cress | nucleus | 11.63 | 11.6 |
| AT3G18550.3 | Thale cress | nucleus | 11.91 | 9.91 |
Protein Annotations
| MapMan:15.5.19 | EntrezGene:817659 | ProteinID:AAC63845.1 | ProteinID:AEC08487.1 | ArrayExpress:AT2G31070 | EnsemblPlantsGene:AT2G31070 |
| RefSeq:AT2G31070 | TAIR:AT2G31070 | RefSeq:AT2G31070-TAIR-G | EnsemblPlants:AT2G31070.1 | TAIR:AT2G31070.1 | EMBL:AY059945 |
| Unigene:At.25238 | EMBL:BT001194 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009965 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0045962 |
| GO:GO:0048366 | InterPro:IPR017887 | RefSeq:NP_565712.1 | UniProt:O82277 | PFAM:PF03634 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF13 | Symbol:TCP10 | InterPro:TF_TCP_subgr | InterPro:Transcription_factor_TCP |
| UniParc:UPI00000AC510 | SEG:seg | : | : | : | : |
Description
TCP10Transcription factor TCP10 [Source:UniProtKB/Swiss-Prot;Acc:O82277]
Coordinates
chr2:-:13220478..13222642
Molecular Weight (calculated)
40381.5 Da
IEP (calculated)
7.122
GRAVY (calculated)
-0.952
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLKGYSVGE GGGEIVEVQG GHIIRATGRK DRHSKVFTSK GPRDRRVRLS AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KTAIDKLELG ETTTTTTRQE
101: PVNTKPESPT LVFQRENNDQ TQFVAANLDP EDAMKTFFPA TTTTNGGGGT NINFQNYPHQ DDNNMVSRTT TPPPNLSQDL GLSLHPFQGN NNTVVVPETN
201: NFTTTHFDTF GRISGWNHHD LTMTSSSSSE HQQQEQEERS NGGFMVNHHP HHHHHQPSMM TLLNSQQQQV FLGGQQQQQQ RGTLQSSLFP HSFRSWDHHQ
301: TTSDHHHHQN QASSMFASSS QYGSHGMMMM QGLSFPNTTR LLHGEEATQP NSSSSPPNSH L
101: PVNTKPESPT LVFQRENNDQ TQFVAANLDP EDAMKTFFPA TTTTNGGGGT NINFQNYPHQ DDNNMVSRTT TPPPNLSQDL GLSLHPFQGN NNTVVVPETN
201: NFTTTHFDTF GRISGWNHHD LTMTSSSSSE HQQQEQEERS NGGFMVNHHP HHHHHQPSMM TLLNSQQQQV FLGGQQQQQQ RGTLQSSLFP HSFRSWDHHQ
301: TTSDHHHHQN QASSMFASSS QYGSHGMMMM QGLSFPNTTR LLHGEEATQP NSSSSPPNSH L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.