Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02519 | Canola | nucleus | 62.92 | 71.51 |
| Bra030952.1-P | Field mustard | nucleus | 62.92 | 71.3 |
| AT3G15030.1 | Thale cress | nucleus | 68.54 | 63.81 |
| AT2G31070.1 | Thale cress | nucleus | 34.53 | 37.4 |
| Zm00001d008919_P001 | Maize | nucleus, plastid | 40.15 | 36.94 |
| TraesCS3B01G164500.1 | Wheat | nucleus | 42.46 | 36.89 |
| TraesCS3A01G140100.1 | Wheat | nucleus | 42.97 | 36.76 |
| TraesCS3D01G146900.1 | Wheat | nucleus | 42.46 | 36.56 |
| VIT_10s0003g00870.t01 | Wine grape | nucleus | 29.67 | 30.37 |
| Zm00001d039371_P001 | Maize | mitochondrion | 42.97 | 29.73 |
| Os01t0213800-01 | Rice | mitochondrion | 42.71 | 28.84 |
| Zm00001d043423_P001 | Maize | nucleus | 31.71 | 28.57 |
| HORVU3Hr1G028240.5 | Barley | extracellular, golgi, mitochondrion | 42.97 | 28.47 |
| KXG33398 | Sorghum | nucleus | 32.74 | 28.38 |
| Os01t0755500-01 | Rice | cytosol, mitochondrion | 31.2 | 27.35 |
| OQU86111 | Sorghum | plastid | 41.43 | 25.84 |
| AT5G08070.1 | Thale cress | nucleus, plastid | 14.07 | 22.73 |
| AT1G30210.1 | Thale cress | nucleus | 18.41 | 22.22 |
| AT4G18390.1 | Thale cress | nucleus | 19.95 | 21.37 |
| HORVU0Hr1G006890.2 | Barley | cytosol | 10.49 | 19.07 |
| AT3G02150.2 | Thale cress | nucleus | 16.62 | 18.31 |
| AT5G60970.1 | Thale cress | nucleus | 16.37 | 17.78 |
| Zm00001d012725_P002 | Maize | plastid | 30.18 | 16.91 |
| AT1G67260.1 | Thale cress | nucleus | 14.07 | 15.32 |
| AT1G68800.2 | Thale cress | nucleus | 10.49 | 11.33 |
| AT3G18550.3 | Thale cress | nucleus | 10.49 | 9.45 |
Protein Annotations
| MapMan:15.5.19 | EntrezGene:841756 | UniProt:A0A178WDV9 | ProteinID:AAF69550.1 | ProteinID:AEE32909.1 | EMBL:AF072134 |
| ProteinID:ANM60190.1 | ArrayExpress:AT1G53230 | EnsemblPlantsGene:AT1G53230 | RefSeq:AT1G53230 | TAIR:AT1G53230 | RefSeq:AT1G53230-TAIR-G |
| EnsemblPlants:AT1G53230.1 | TAIR:AT1G53230.1 | EMBL:AY099678 | Unigene:At.75138 | EMBL:BT000266 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 |
| GO:GO:0009965 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0045962 | GO:GO:0048366 | InterPro:IPR017887 |
| RefSeq:NP_001322492.1 | RefSeq:NP_564624.2 | ProteinID:OAP16416.1 | PFAM:PF03634 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000056 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS51369 | PANTHER:PTHR31072 | PANTHER:PTHR31072:SF13 | UniProt:Q9MAH8 | Symbol:TCP3 | InterPro:TF_TCP_subgr |
| InterPro:Transcription_factor_TCP | UniParc:UPI00000AC6E0 | SEG:seg | : | : | : |
Description
TCP3TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9]
Coordinates
chr1:-:19849788..19851725
Molecular Weight (calculated)
43046.5 Da
IEP (calculated)
6.802
GRAVY (calculated)
-0.818
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPDNDHFLD SPSPPLLEMR HHQSATENGG GCGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLS APTAIQFYDV QDRLGFDRPS KAVDWLITKA
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
101: KSAIDDLAQL PPWNPADTLR QHAAAAANAK PRKTKTLISP PPPQPEETEH HRIGEEEDNE SSFLPASMDS DSIADTIKSF FPVASTQQSY HHQPPSRGNT
201: QNQDLLRLSL QSFQNGPPFP NQTEPALFSG QSNNQLAFDS STASWEQSHQ SPEFGKIQRL VSWNNVGAAE SAGSTGGFVF ASPSSLHPVY SQSQLLSQRG
301: PLQSINTPMI RAWFDPHHHH HHHQQSMTTD DLHHHHPYHI PPGIHQSAIP GIAFASSGEF SGFRIPARFQ GEQEEHGGDN KPSSASSDSR H
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.