Factsheet for Zm00001d032217_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13882	Sorghum	cytosol	84.17	78.6
Zm00001d050389_P001	Maize	nucleus	71.67	62.77
TraesCS2B01G025700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	44.17	51.96
TraesCS2A01G018000.1	Wheat	cytosol	43.75	51.47
TraesCS2D01G019300.1	Wheat	extracellular	45.0	45.76
Zm00001d020433_P001	Maize	nucleus	40.83	38.74
Os08t0432300-00	Rice	nucleus	47.08	38.18
Zm00001d005737_P001	Maize	cytosol	39.17	34.06
Zm00001d033673_P001	Maize	cytosol, nucleus, peroxisome, plastid	31.25	20.49
Zm00001d013467_P001	Maize	nucleus	27.08	18.11
Zm00001d010730_P001	Maize	cytosol, plastid	18.33	16.0
Zm00001d038683_P001	Maize	cytosol	19.58	15.77
Zm00001d043368_P001	Maize	cytosol	18.33	15.55
Zm00001d022256_P001	Maize	nucleus	18.75	13.93
Zm00001d013119_P001	Maize	cytosol, nucleus, plastid	19.58	12.34
Zm00001d034353_P001	Maize	cytosol	18.75	11.66
Zm00001d007868_P001	Maize	nucleus	20.0	10.91
Zm00001d018806_P001	Maize	nucleus	19.17	10.53
Zm00001d043423_P001	Maize	nucleus	18.33	10.14
Zm00001d008919_P001	Maize	nucleus, plastid	16.25	9.18
Zm00001d039371_P001	Maize	mitochondrion	18.75	7.96
Zm00001d012725_P002	Maize	plastid	17.5	6.02

Protein Annotations

EntrezGene:100282571	MapMan:15.5.19	UniProt:A0A060D6L2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR017887	EMBL:KJ727762	ProteinID:ONM04609.1	PFAM:PF03634	PFscan:PS51369	PANTHER:PTHR31072
PANTHER:PTHR31072:SF68	InterPro:TF_TCP_subgr	InterPro:Transcription_factor_TCP	UniParc:UPI0002216F12	EnsemblPlantsGene:Zm00001d032217	EnsemblPlants:Zm00001d032217_P001
EnsemblPlants:Zm00001d032217_T001	SEG:seg	:	:	:	:

Description

TCP-transcription factor 11Teosinte branched1 protein

Coordinates

chr1:-:217455034..217455756

Molecular Weight (calculated)

26113.8 Da

IEP (calculated)

4.999

GRAVY (calculated)

-0.445

Length

240 amino acids

Sequence
(BLAST)

001: MPSTAMSWDG YGAQIFLADM SFHHQDTLEA VFQQPAETTL LQAPAGEKEL PSNGSPPVVD DAGVQAAAVL RKRPFRTDRH SKIRTAQGVR DRRMRLSVGV
101: AREFFALQDR LGFDKASKTV NWLLAQSKPA IDRLVDAADQ AAVVTGGGPT LVKGRGEGSN SSTCCLTDSR EELATEKGRS RAGDAGLDWP PPLIEEHGCG
201: ELGWIMSEAT ATPEQDGLEC YYQYCLQLEE LMRCNGGMPR

Best Arabidopsis Sequence Match ( AT3G18550.2 )
(BLAST)

001: MNNNIFSTTT TINDDYMLFP YNDHYSSQPL LPFSPSSSIN DILIHSTSNT SNNHLDHHHQ FQQPSPFSHF EFAPDCALLT SFHPENNGHD DNQTIPNDNH
101: HPSLHFPLNN TIVEQPTEPS ETINLIEDSQ RISTSQDPKM KKAKKPSRTD RHSKIKTAKG TRDRRMRLSL DVAKELFGLQ DMLGFDKASK TVEWLLTQAK
201: PEIIKIATTL SHHGCFSSGD ESHIRSMDTS SDLCELASMW TVDDRGSNTN TTETRGNKVD GRSMRGKRKR PEPRTPILKK LSKEERAKAR ERAKGRTMEK
301: MMMKMKGRSQ LVKVVEEDAH DHGEIIKNNN RSQVNRSSFE MTHCEDKIEE LCKNDRFAVC NEFIMNKKDH ISNESYDLVN YKPNSSFPVI NHHRSQGAAN
401: SIEQHQFTDL HYSFGAKPRD LMHNYQNMY

Arabidopsis Description

BRC1TCP family transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSP1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.