Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • plastid 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G262700.1 Wheat cytosol, plastid 77.84 72.0
HORVU5Hr1G072870.1 Barley cytosol, plastid 77.84 72.0
TraesCS5D01G271000.1 Wheat cytosol 75.14 70.92
Zm00001d020925_P001 Maize cytosol 74.59 70.77
OQU89684 Sorghum mitochondrion 77.84 70.59
TraesCS5A01G263400.1 Wheat cytosol 73.51 69.39
Os02t0717900-01 Rice cytosol 62.16 58.67
GSMUA_Achr8P25620_001 Banana cytosol 58.38 57.14
VIT_06s0004g01810.t01 Wine grape nucleus 49.73 49.73
CDX97222 Canola cytosol, mitochondrion, nucleus, peroxisome 49.19 49.73
CDX69673 Canola cytosol, mitochondrion, nucleus, peroxisome 48.65 49.18
Bra008859.1-P Field mustard nucleus 48.65 49.18
KRH10183 Soybean nucleus 48.65 48.65
CDX91148 Canola cytosol 48.11 48.63
CDX85672 Canola cytosol 47.57 48.09
Bra023390.1-P Field mustard cytosol 47.57 48.09
AT5G13070.1 Thale cress cytosol, mitochondrion, nucleus, peroxisome 47.03 47.54
Solyc12g100050.1.1 Tomato nucleus 45.95 45.95
PGSC0003DMT400035362 Potato nucleus 45.41 45.41
PGSC0003DMT400061228 Potato nucleus 44.86 44.86
Solyc11g061760.1.1 Tomato nucleus 44.86 44.62
Protein Annotations
EntrezGene:107278595MapMan:5.2.3.3.1.1.1UniProt:A0A0P0XNF3ProteinID:BAT08701.1GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005758InterPro:IPR006797EnsemblPlantsGene:Os09g0486000
EnsemblPlants:Os09t0486000-00PFAM:PF04707InterPro:PRELI/MSF1_domPFscan:PS50904PANTHER:PTHR11158PANTHER:PTHR11158:SF28
InterPro:Slowmo/UpsUniParc:UPI0001C7ABBBRefSeq:XP_015612092.1SEG:seg::
Description
Similar to BCR/ABL-regulated protein. (Os09t0486000-00)
Coordinates
chr9:+:18754630..18755187
Molecular Weight (calculated)
20711.8 Da
IEP (calculated)
8.517
GRAVY (calculated)
-0.201
Length
185 amino acids
Sequence
(BLAST)
001: MVVSYTQEHV YRHPWHRVTA AAWRKFTDAD ARAAPLSHIL EVHTLSRRVD AGSGRIDAVR AIAGRAPPLP LLLRGLVAAA DVVLCVEHTT VDGPARAMRV
101: ISRNANLRAL VHVEETCSYR PHPERPDEWT LFRQETSIRC APLAAVAAWA AEMVERRCAE RFRQNASQGR EVVETICERL ALADH
Best Arabidopsis Sequence Match ( AT5G13070.1 )
(BLAST)
001: MVKAYRQEHV YKHPWERVSA ASWRKFADPE NKRILSHILE VDTLNRKLDT ETGKLHTTRA LTIHAPGPWF LHRIIGQDIC HCVESTVVDG KSRSMQLTTK
101: NISLKKFIEV EERIRYDPHP DNPSAWTVCS QETSIRIKPL SALASMAEKV EQKCAEKFMQ NSAKGREVME RICKYMEAES ARI
Arabidopsis Description
At5g13070 [Source:UniProtKB/TrEMBL;Acc:Q9FYA3]
SUBAcon: [cytosol,nucleus,peroxisome,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.