Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008859.1-P | Field mustard | nucleus | 96.17 | 96.17 |
| Bra023390.1-P | Field mustard | cytosol | 95.63 | 95.63 |
| CDX69673 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 95.63 | 95.63 |
| CDX85672 | Canola | cytosol | 95.63 | 95.63 |
| CDX91148 | Canola | cytosol | 95.08 | 95.08 |
| CDX97222 | Canola | cytosol, mitochondrion, nucleus, peroxisome | 93.44 | 93.44 |
| VIT_06s0004g01810.t01 | Wine grape | nucleus | 81.42 | 80.54 |
| Solyc12g100050.1.1 | Tomato | nucleus | 81.42 | 80.54 |
| PGSC0003DMT400061228 | Potato | nucleus | 81.42 | 80.54 |
| KRH10183 | Soybean | nucleus | 80.33 | 79.46 |
| PGSC0003DMT400035362 | Potato | nucleus | 78.14 | 77.3 |
| Solyc11g061760.1.1 | Tomato | nucleus | 78.14 | 76.88 |
| GSMUA_Achr8P25620_001 | Banana | cytosol | 60.11 | 58.2 |
| EES05620 | Sorghum | cytosol | 57.38 | 53.57 |
| Zm00001d051661_P001 | Maize | mitochondrion | 56.83 | 53.06 |
| TraesCS6A01G281500.1 | Wheat | cytosol | 56.28 | 52.55 |
| TraesCS6B01G310300.1 | Wheat | cytosol | 56.28 | 52.55 |
| TraesCS6D01G262200.1 | Wheat | cytosol | 56.28 | 52.55 |
| HORVU6Hr1G070680.2 | Barley | cytosol | 56.28 | 52.55 |
| Os02t0717900-01 | Rice | cytosol | 55.74 | 52.04 |
| Os09t0486000-00 | Rice | cytosol | 47.54 | 47.03 |
| TraesCS5D01G271000.1 | Wheat | cytosol | 48.09 | 44.9 |
| TraesCS5B01G262700.1 | Wheat | cytosol, plastid | 48.09 | 44.0 |
| HORVU5Hr1G072870.1 | Barley | cytosol, plastid | 48.09 | 44.0 |
| TraesCS5A01G263400.1 | Wheat | cytosol | 46.45 | 43.37 |
| Zm00001d020925_P001 | Maize | cytosol | 45.9 | 43.08 |
| OQU89684 | Sorghum | mitochondrion | 46.99 | 42.16 |
Protein Annotations
| MapMan:5.2.3.3.1.1.1 | EntrezGene:831146 | UniProt:A0A178URA9 | ProteinID:AED91847.1 | ArrayExpress:AT5G13070 | EnsemblPlantsGene:AT5G13070 |
| RefSeq:AT5G13070 | TAIR:AT5G13070 | RefSeq:AT5G13070-TAIR-G | EnsemblPlants:AT5G13070.1 | TAIR:AT5G13070.1 | EMBL:BT021976 |
| EMBL:BT023475 | ProteinID:CAC05435.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005758 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015914 | GO:GO:1990050 | InterPro:IPR006797 | RefSeq:NP_196811.1 | ProteinID:OAO96348.1 | PFAM:PF04707 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | InterPro:PRELI/MSF1_dom | PFscan:PS50904 | PANTHER:PTHR11158 |
| PANTHER:PTHR11158:SF17 | UniProt:Q9FYA3 | InterPro:Slowmo/Ups | UniParc:UPI00000A0F6A | : | : |
Description
At5g13070 [Source:UniProtKB/TrEMBL;Acc:Q9FYA3]
Coordinates
chr5:+:4147596..4149391
Molecular Weight (calculated)
21177.5 Da
IEP (calculated)
9.253
GRAVY (calculated)
-0.597
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKAYRQEHV YKHPWERVSA ASWRKFADPE NKRILSHILE VDTLNRKLDT ETGKLHTTRA LTIHAPGPWF LHRIIGQDIC HCVESTVVDG KSRSMQLTTK
101: NISLKKFIEV EERIRYDPHP DNPSAWTVCS QETSIRIKPL SALASMAEKV EQKCAEKFMQ NSAKGREVME RICKYMEAES ARI
101: NISLKKFIEV EERIRYDPHP DNPSAWTVCS QETSIRIKPL SALASMAEKV EQKCAEKFMQ NSAKGREVME RICKYMEAES ARI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.