Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g078390.2.1 | Tomato | plastid | 96.24 | 73.43 |
| KRH20465 | Soybean | cytosol | 16.62 | 56.65 |
| KRH50031 | Soybean | plastid | 61.71 | 46.72 |
| CDX91525 | Canola | plastid | 54.48 | 42.5 |
| Bra022497.1-P | Field mustard | plastid | 53.76 | 41.99 |
| AT1G65070.2 | Thale cress | plastid | 53.03 | 41.9 |
| GSMUA_Achr7P04320_001 | Banana | plastid | 51.73 | 39.34 |
| CDY16386 | Canola | plastid | 53.47 | 31.33 |
| PGSC0003DMT400021697 | Potato | cytosol, extracellular, nucleus | 4.48 | 15.42 |
| PGSC0003DMT400032552 | Potato | cytosol, peroxisome, plastid | 9.39 | 15.37 |
| PGSC0003DMT400021699 | Potato | cytosol | 3.32 | 14.47 |
| PGSC0003DMT400001555 | Potato | cytosol | 3.61 | 12.69 |
| PGSC0003DMT400010422 | Potato | cytosol | 11.71 | 8.59 |
Protein Annotations
| Gene3D:3.30.1370.110 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_sf | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0030983 | GO:GO:0045910 | GO:GO:0090305 |
| InterPro:IPR002625 | UniProt:M1C1G3 | InterPro:MutS2 | InterPro:P-loop_NTPase | PFAM:PF00488 | PFAM:PF01713 |
| EnsemblPlantsGene:PGSC0003DMG400022387 | PGSC:PGSC0003DMG400022387 | EnsemblPlants:PGSC0003DMT400057653 | PIRSF:PIRSF005814 | ScanProsite:PS00486 | PFscan:PS50828 |
| PANTHER:PTHR11361 | PANTHER:PTHR11361:SF14 | SMART:SM00463 | SMART:SM00534 | SUPFAM:SSF160443 | SUPFAM:SSF48334 |
| SUPFAM:SSF52540 | InterPro:Smr_dom | InterPro:Smr_dom_sf | UniParc:UPI000295FB7C | : | : |
Description
DNA mismatch repair protein muts2 [Source:PGSC_GENE;Acc:PGSC0003DMG400022387]
Coordinates
chr2:-:34080115..34084138
Molecular Weight (calculated)
76436.3 Da
IEP (calculated)
5.897
GRAVY (calculated)
-0.284
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLESLLKQ LSIQVFQGGG FDRPLVTKRR SRLCVAVRAS HRSLLPNSVI LDTSSSGSTY FMEPKEAVEL NNMEVKLSSS ERVEEQTILS LLTSEIAESN
101: MKIKHLLDKI LEIDLAFARA AHAQWMGAAC PALSPRNCNI SQSEHLSINV EGIQHPLLLE SSLRNLSTDV SPRSPDLDQG NGVMNFETKS HAHFPVPIDI
201: KIGHGTKVVV ISGPNTGGKT ASMKTLGLAS MMLKAGMYLP AQNKPRLPWF DLILADIGDQ QSLEQSLSTF SGHISRLREI LEVASRESLV LIDEIGSGTD
301: PSEGVALSES VLQYLKDRVN LAVVTTHYAD LTRLKEKDNQ FETAATEFSL ETLQPTYRIL WGSMGESNAL NIAKSMGFDE RIIEQAVLWV NKLRPDKQQE
401: QKGLLYRSLI EERDRLESQA IEAASLHSDI MIIYNEINNE TQDLDGREAA LIAKETHEIQ QEARTVKNEI QTIVQRFESQ LGNVSADEIN TLVKKAEAAI
501: ASIVEAHQPS KDSLVREIGQ SLYTPQVGEQ VYVKAFGNKL ATVVEEPGND DTILVQYGKI RVRVGRSSIR PIPPDASSSA ATLKTQVQRI RSLRDLGSLS
601: EASKNQQDSY GPVLQTSKNT VDLRGLRVED ASHQLNIAID SRAPNSVIFV IHGMGSGVVK ESALKLLRDH PRVVKFEEES PMNYGCTVAY IK
101: MKIKHLLDKI LEIDLAFARA AHAQWMGAAC PALSPRNCNI SQSEHLSINV EGIQHPLLLE SSLRNLSTDV SPRSPDLDQG NGVMNFETKS HAHFPVPIDI
201: KIGHGTKVVV ISGPNTGGKT ASMKTLGLAS MMLKAGMYLP AQNKPRLPWF DLILADIGDQ QSLEQSLSTF SGHISRLREI LEVASRESLV LIDEIGSGTD
301: PSEGVALSES VLQYLKDRVN LAVVTTHYAD LTRLKEKDNQ FETAATEFSL ETLQPTYRIL WGSMGESNAL NIAKSMGFDE RIIEQAVLWV NKLRPDKQQE
401: QKGLLYRSLI EERDRLESQA IEAASLHSDI MIIYNEINNE TQDLDGREAA LIAKETHEIQ QEARTVKNEI QTIVQRFESQ LGNVSADEIN TLVKKAEAAI
501: ASIVEAHQPS KDSLVREIGQ SLYTPQVGEQ VYVKAFGNKL ATVVEEPGND DTILVQYGKI RVRVGRSSIR PIPPDASSSA ATLKTQVQRI RSLRDLGSLS
601: EASKNQQDSY GPVLQTSKNT VDLRGLRVED ASHQLNIAID SRAPNSVIFV IHGMGSGVVK ESALKLLRDH PRVVKFEEES PMNYGCTVAY IK
001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.