Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057653 | Potato | plastid | 73.43 | 96.24 |
| KRH50031 | Soybean | plastid | 60.2 | 59.74 |
| KRH20465 | Soybean | cytosol | 12.79 | 57.14 |
| Bra022497.1-P | Field mustard | plastid | 51.93 | 53.16 |
| CDX91525 | Canola | plastid | 51.93 | 53.1 |
| AT1G65070.2 | Thale cress | plastid | 50.72 | 52.51 |
| Zm00001d001806_P001 | Maize | plastid | 51.16 | 51.5 |
| EES11666 | Sorghum | plastid | 51.16 | 50.88 |
| GSMUA_Achr7P04320_001 | Banana | plastid | 50.94 | 50.77 |
| TraesCS2A01G588000.2 | Wheat | plastid | 50.83 | 50.33 |
| TraesCS2B01G595200.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 50.83 | 50.22 |
| TraesCS2D01G565200.1 | Wheat | plastid | 50.5 | 49.95 |
| HORVU2Hr1G118740.5 | Barley | plastid | 46.42 | 48.22 |
| Os04t0680700-01 | Rice | plastid | 24.92 | 45.47 |
| CDY16386 | Canola | plastid | 51.49 | 39.54 |
| Solyc03g080010.2.1 | Tomato | plastid | 21.5 | 23.61 |
| Solyc09g090890.1.1 | Tomato | extracellular | 2.54 | 15.97 |
| Solyc10g018530.1.1 | Tomato | endoplasmic reticulum, vacuole | 8.05 | 14.29 |
| Solyc07g018350.2.1 | Tomato | nucleus | 11.03 | 12.33 |
| Solyc06g069230.2.1 | Tomato | cytosol | 11.47 | 11.03 |
| Solyc08g007330.2.1 | Tomato | cytosol, peroxisome, plastid | 9.48 | 10.86 |
| Solyc03g025890.1.1 | Tomato | nucleus | 12.35 | 10.03 |
| Solyc09g090870.2.1 | Tomato | mitochondrion | 12.13 | 9.67 |
| Solyc01g079520.2.1 | Tomato | plastid | 12.9 | 8.92 |
| Solyc10g018540.1.1 | Tomato | cytosol | 2.21 | 5.83 |
Protein Annotations
| Gene3D:3.30.1370.110 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_core |
| InterPro:DNA_mismatch_repair_MutS_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 |
| GO:GO:0003824 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 |
| GO:GO:0006950 | GO:GO:0008094 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0030983 | GO:GO:0032300 | GO:GO:0045910 | GO:GO:0090305 | InterPro:IPR002625 |
| UniProt:K4B963 | InterPro:MutS2 | InterPro:P-loop_NTPase | PFAM:PF00488 | PFAM:PF01713 | PIRSF:PIRSF005814 |
| ScanProsite:PS00486 | PFscan:PS50828 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF14 | SMART:SM00463 | SMART:SM00533 |
| SMART:SM00534 | SUPFAM:SSF160443 | SUPFAM:SSF48334 | SUPFAM:SSF52540 | InterPro:Smr_dom | InterPro:Smr_dom_sf |
| EnsemblPlantsGene:Solyc02g078390.2 | EnsemblPlants:Solyc02g078390.2.1 | UniParc:UPI00027680E4 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2:-:43086673..43091786
Molecular Weight (calculated)
100507.0 Da
IEP (calculated)
5.948
GRAVY (calculated)
-0.242
Length
907 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLFNFNCKC KSNNFFSIHL PPPHSSLCNR RTTRFSVRFS SESTHRVKLA ESLQSETLKL LEWPAVCQQL SAFTSTSMGY AAAQSARIPV GKTREESSRL
101: LSQTSAAVAV PRPLDFTGIE DISPIVDASV AGGVLSIREL CSVKRTLAAA RFLLQQLEEI DFSERYSSLK EILHSCDFLV ELEQKIEFCI DCSFSVILDR
201: ASEDLEIIRS ERKRNMDNLE LLLKQLSTQV FQGGGFDRPL VTKRRSRLCV AVRASHRSLL PNSVILDTSS SGSTYFMEPK EAVELNNMEV KLSSSEKVEE
301: QTILSLLTSE IAESNMKIKH LLDKILEIDL AFARAAHAQW MGAACPALSP RNCNISQSEH LSINVEGIQH PLLLESSLEN LSTDVSPRSP DLDQGNGVVN
401: FETKSHAHFP VPIDIKIGHG TKVVVISGPN TGGKTASMKT LGLASMMLKA GMYLPAQNKP QLPWFDLILA DIGDQQSLEQ SLSTFSGHIS RLREILEVAS
501: GESLVLIDEI GSGTDPSEGV ALSESILQYL KDRVNLAVVT THYADLTRLK EKDNRFETAA TEFSLETLQP TYRILWGSMG ESNALNIAKS MGFDERIIER
601: AVLWVNKLRP DKQQEQKGLL YRSLIEERDR LESQAMEAAS LHSDIMNIYN EINNETQDLD GREAALIAKE THEIQQEVRA VKNEIQTIVQ RFESQLGNVS
701: VDEINTLVKK AEAAIASIVE AHQPSKDFLV REIGQSLYTP QVGEQVYVKA FGNKLATVVE EPGDDDTILV QYGKIKVRVD KSSIRPIPPD ASSSAANLKT
801: QVQQIRSLRD LGSLSEASKN QQDSYGPVLQ TSKNTVDLRG LRVEDASHQL KIAIDSRAPN SVIFVIHGMG TGVVKESALK LLKDHPRVVK FEPESPMNYG
901: CTVAYIK
101: LSQTSAAVAV PRPLDFTGIE DISPIVDASV AGGVLSIREL CSVKRTLAAA RFLLQQLEEI DFSERYSSLK EILHSCDFLV ELEQKIEFCI DCSFSVILDR
201: ASEDLEIIRS ERKRNMDNLE LLLKQLSTQV FQGGGFDRPL VTKRRSRLCV AVRASHRSLL PNSVILDTSS SGSTYFMEPK EAVELNNMEV KLSSSEKVEE
301: QTILSLLTSE IAESNMKIKH LLDKILEIDL AFARAAHAQW MGAACPALSP RNCNISQSEH LSINVEGIQH PLLLESSLEN LSTDVSPRSP DLDQGNGVVN
401: FETKSHAHFP VPIDIKIGHG TKVVVISGPN TGGKTASMKT LGLASMMLKA GMYLPAQNKP QLPWFDLILA DIGDQQSLEQ SLSTFSGHIS RLREILEVAS
501: GESLVLIDEI GSGTDPSEGV ALSESILQYL KDRVNLAVVT THYADLTRLK EKDNRFETAA TEFSLETLQP TYRILWGSMG ESNALNIAKS MGFDERIIER
601: AVLWVNKLRP DKQQEQKGLL YRSLIEERDR LESQAMEAAS LHSDIMNIYN EINNETQDLD GREAALIAKE THEIQQEVRA VKNEIQTIVQ RFESQLGNVS
701: VDEINTLVKK AEAAIASIVE AHQPSKDFLV REIGQSLYTP QVGEQVYVKA FGNKLATVVE EPGDDDTILV QYGKIKVRVD KSSIRPIPPD ASSSAANLKT
801: QVQQIRSLRD LGSLSEASKN QQDSYGPVLQ TSKNTVDLRG LRVEDASHQL KIAIDSRAPN SVIFVIHGMG TGVVKESALK LLKDHPRVVK FEPESPMNYG
901: CTVAYIK
001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.