Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 3
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G565200.1 | Wheat | plastid | 95.21 | 95.31 |
| TraesCS2A01G588000.2 | Wheat | plastid | 94.66 | 94.87 |
| HORVU2Hr1G118740.5 | Barley | plastid | 81.7 | 85.91 |
| Os04t0680700-01 | Rice | plastid | 41.18 | 76.06 |
| EES11666 | Sorghum | plastid | 74.07 | 74.56 |
| Zm00001d001806_P001 | Maize | plastid | 72.77 | 74.14 |
| GSMUA_Achr7P04320_001 | Banana | plastid | 56.64 | 57.14 |
| Solyc02g078390.2.1 | Tomato | plastid | 50.22 | 50.83 |
| AT1G65070.2 | Thale cress | plastid | 45.86 | 48.06 |
| CDX91525 | Canola | plastid | 45.42 | 47.01 |
| Bra022497.1-P | Field mustard | plastid | 44.88 | 46.5 |
| CDY16386 | Canola | plastid | 45.32 | 35.22 |
| TraesCS1B01G200700.1 | Wheat | plastid | 24.18 | 26.81 |
| PGSC0003DMT400001555 | Potato | cytosol | 2.83 | 13.2 |
| TraesCS1B01G328200.1 | Wheat | cytosol | 7.41 | 12.83 |
| TraesCS2B01G198300.1 | Wheat | cytosol | 10.24 | 11.65 |
| TraesCS1B01G149700.3 | Wheat | nucleus | 11.0 | 10.48 |
| TraesCS2B01G379900.1 | Wheat | mitochondrion | 12.53 | 10.2 |
| TraesCS2B01G372400.1 | Wheat | mitochondrion, plastid | 11.11 | 9.69 |
| TraesCS2B01G372300.1 | Wheat | plastid | 11.11 | 9.24 |
| TraesCS3B01G287700.1 | Wheat | cytosol | 8.17 | 8.48 |
| TraesCS3B01G136600.1 | Wheat | mitochondrion | 11.0 | 8.27 |
| KRH33415 | Soybean | cytosol, extracellular, plastid | 0.87 | 6.5 |
| KRG88725 | Soybean | nucleus | 0.98 | 3.16 |
Protein Annotations
| Gene3D:3.30.1370.110 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_core |
| InterPro:DNA_mismatch_repair_MutS_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006298 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0030983 | GO:GO:0045910 | InterPro:IPR002625 | InterPro:MutS2 | InterPro:P-loop_NTPase |
| PFAM:PF00488 | PFAM:PF01713 | PIRSF:PIRSF005814 | ScanProsite:PS00486 | PFscan:PS50828 | PANTHER:PTHR11361 |
| PANTHER:PTHR11361:SF14 | SMART:SM00463 | SMART:SM00533 | SMART:SM00534 | SUPFAM:SSF160443 | SUPFAM:SSF48334 |
| SUPFAM:SSF52540 | SignalP:SignalP-noTM | InterPro:Smr_dom | InterPro:Smr_dom_sf | EnsemblPlantsGene:TraesCS2B01G595200 | EnsemblPlants:TraesCS2B01G595200.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:779339248..779344166
Molecular Weight (calculated)
99516.3 Da
IEP (calculated)
6.833
GRAVY (calculated)
-0.166
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MATIVAAAAL NLYLRLPLAL HCTVSFPARL SRIPHAPPRR LRSAAASRTL ASPATSEVPE AEELRLEAES ALEWGGVCAR LADFAATAAG RAACGEGRVP
101: VGRSREESER LLEQTAAASL LSAPLDFDGV GDVSAVVAAA ARGRLLAVRE ICGVGRSLRA ARGVFDQVKS LAEEMPDGRY TSLLDILQGC DFLTELVKMI
201: EFCLDSNLSM VLDRASERLG TIRKERRMNI DMLESLLRDT SVKIFQAGGA DSPVVTKRRS RMCVGVKASH KHLVPGGIVL SSSGSGATYF MEPRDAVKLN
301: NTEVKLSGDE RAEELAVLGL LTSRIAESRT KIRHLMGKIL ELDLACARGS YALWINGVRP AFSNRDGSSE LDPSSAYSVF IEGIRHPLLL EQSLGTVEEL
401: TAEATEVGKE QLSEDRPVPS MPVPLDMHVK NDTRIVVISG PNTGGKTATM KTLGLASLMS KAGMFFPAKG RPRLPWFDQV LADIGDHQSL ENSLSTFSGN
501: ISRLRKIAQV VSTDSLVLID EIGSGTDPSE GVSLSTSILK YLASRLNLAV VTTHYADLSR LKAVDDRFEN AAMEFCLETL KPTYRVLWGS TGYSNALSIA
601: KSIGFDQKVL DRAQEWVEKL LPDKQKERQG LLYGSLLDER NLLESQANEV ASVLSEVEDL YNEIRLEADE LDNRVAALKA RESRKVQQEL KSVKSQMDLL
701: IKNFEVQLKN SKLEQYNSVM RKAEAATASL AAAHQPTEFA VSDDENKSLY VPQIGDKVYV EGLGGGSMAT VVEILSEDGS CMVQYGKIKV RAKSNKMKLA
801: QRDTKETSAS SSAQGKGSRT QKRSAAGTAQ TGSVSFAPAV QTSRNTVDLR GMRVGEASHE LEMAIDGCRA YQVLFVVHGM GTGAVKECAL GVLRSHPRVV
901: RIEDESPLNY GCTVAYIE
101: VGRSREESER LLEQTAAASL LSAPLDFDGV GDVSAVVAAA ARGRLLAVRE ICGVGRSLRA ARGVFDQVKS LAEEMPDGRY TSLLDILQGC DFLTELVKMI
201: EFCLDSNLSM VLDRASERLG TIRKERRMNI DMLESLLRDT SVKIFQAGGA DSPVVTKRRS RMCVGVKASH KHLVPGGIVL SSSGSGATYF MEPRDAVKLN
301: NTEVKLSGDE RAEELAVLGL LTSRIAESRT KIRHLMGKIL ELDLACARGS YALWINGVRP AFSNRDGSSE LDPSSAYSVF IEGIRHPLLL EQSLGTVEEL
401: TAEATEVGKE QLSEDRPVPS MPVPLDMHVK NDTRIVVISG PNTGGKTATM KTLGLASLMS KAGMFFPAKG RPRLPWFDQV LADIGDHQSL ENSLSTFSGN
501: ISRLRKIAQV VSTDSLVLID EIGSGTDPSE GVSLSTSILK YLASRLNLAV VTTHYADLSR LKAVDDRFEN AAMEFCLETL KPTYRVLWGS TGYSNALSIA
601: KSIGFDQKVL DRAQEWVEKL LPDKQKERQG LLYGSLLDER NLLESQANEV ASVLSEVEDL YNEIRLEADE LDNRVAALKA RESRKVQQEL KSVKSQMDLL
701: IKNFEVQLKN SKLEQYNSVM RKAEAATASL AAAHQPTEFA VSDDENKSLY VPQIGDKVYV EGLGGGSMAT VVEILSEDGS CMVQYGKIKV RAKSNKMKLA
801: QRDTKETSAS SSAQGKGSRT QKRSAAGTAQ TGSVSFAPAV QTSRNTVDLR GMRVGEASHE LEMAIDGCRA YQVLFVVHGM GTGAVKECAL GVLRSHPRVV
901: RIEDESPLNY GCTVAYIE
001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.