CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91525	Canola	plastid	72.99	97.18
Bra022497.1-P	Field mustard	plastid	72.65	96.84
AT1G65070.2	Thale cress	plastid	60.37	81.39
PGSC0003DMT400057653	Potato	plastid	31.33	53.47
Solyc02g078390.2.1	Tomato	plastid	39.54	51.49
KRH50031	Soybean	plastid	39.54	51.09
KRH20465	Soybean	cytosol	8.3	48.28
Zm00001d001806_P001	Maize	plastid	35.65	46.73
EES11666	Sorghum	plastid	35.99	46.6
GSMUA_Achr7P04320_001	Banana	plastid	35.82	46.48
TraesCS2D01G565200.1	Wheat	plastid	35.39	45.58
TraesCS2A01G588000.2	Wheat	plastid	35.22	45.41
TraesCS2B01G595200.1	Wheat	endoplasmic reticulum, plastid, vacuole	35.22	45.32
HORVU2Hr1G118740.5	Barley	plastid	32.26	43.64
Os04t0680700-01	Rice	plastid	17.7	42.05
CDY40145	Canola	cytosol, extracellular, plastid	1.95	27.38
CDY28796	Canola	plastid	18.29	26.93
CDY41773	Canola	plastid	18.12	26.72
CDX86902	Canola	cytosol	2.54	24.19
CDX95680	Canola	cytosol	2.2	19.55
CDY52899	Canola	nucleus	9.57	12.06
CDX82340	Canola	nucleus	9.57	12.06
CDX76574	Canola	cytosol, peroxisome, plasma membrane	7.54	11.24
CDY59530	Canola	endoplasmic reticulum, nucleus, peroxisome	7.37	11.07
CDX77432	Canola	mitochondrion	10.25	10.78
CDY49227	Canola	mitochondrion	10.16	10.68
CDY65220	Canola	cytosol	7.2	10.6
CDY19637	Canola	cytosol	7.28	10.11
CDY47171	Canola	mitochondrion, nucleus	8.89	9.61
CDX91808	Canola	mitochondrion, nucleus, plastid	10.67	9.54
CDY50199	Canola	plastid	8.64	9.49
CDY25338	Canola	plastid	8.81	9.45
CDX92716	Canola	plastid	8.64	9.34
CDX90956	Canola	plastid	10.5	9.27
CDY59535	Canola	cytosol	0.34	2.88
CDX76575	Canola	cytosol	0.34	2.88

Protein Annotations

Gene3D:3.30.1370.110	Gene3D:3.40.50.300	MapMan:35.2	GO:A0A078FTL1	UniProt:A0A078FTL1	InterPro:AAA+_ATPase
EnsemblPlants:CDY16386	ProteinID:CDY16386	ProteinID:CDY16386.1	ncoils:Coil	InterPro:DNA_mismatch_repair_MutS_C	InterPro:DNA_mismatch_repair_MutS_core
InterPro:DNA_mismatch_repair_MutS_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006259
GO:GO:0006298	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	GO:GO:0030983	GO:GO:0045910	GO:GO:0090305	EnsemblPlantsGene:GSBRNA2T00090923001	InterPro:IPR002625
InterPro:MutS2	InterPro:P-loop_NTPase	PFAM:PF00488	PFAM:PF01713	ScanProsite:PS00486	PFscan:PS50828
PANTHER:PTHR11361	PANTHER:PTHR11361:SF14	SMART:SM00382	SMART:SM00463	SMART:SM00533	SMART:SM00534
SUPFAM:SSF160443	SUPFAM:SSF48334	SUPFAM:SSF52540	SignalP:SignalP-noTM	InterPro:Smr_dom	InterPro:Smr_dom_sf
UniParc:UPI0004EE0AEC	SEG:seg	:	:	:	:

Description

BnaA02g11900DBnaA02g11900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTL1]

Coordinates

chrLK032063:-:306441..314860

Molecular Weight (calculated)

131081.0 Da

IEP (calculated)

8.486

GRAVY (calculated)

-0.311

Length

1181 amino acids

Sequence
(BLAST)

0001: MNTLSLHLLI PTALHLRSSR AASPSFPRAS SPSSLRITSS SNLRADDSQS IESQTLEVLE WRALCNQLSP FASTSMGLSA TKTADIPVGN SPEESRSLLD
0101: ETAAALAAME AMEPRGLGLS EILDLSEIVE RAMAGQLLTV RELCAVRGTL MAASSVFEKL QRAANSDKRV TPLVKILEGC DFKTTLEHKI GFCIDSNTSV
0201: ILDRASEDLE IIRSERKRNM ETLDSLLKKV STKIYRAGGI DRPTVTKRRS RMCVAIRAIR KRLLPGGVVL SVSSSGATCY MEPKEAVELN NMEVRHAYSE
0301: KAEEMAILSI LTSEVSAAQR GILHLLDRIL QLDVAFARAS HAKWMNGVYP KLTKTLDMDD GDGASLAVDI DSVQHPLLLG SVLGSIPDGG SLFPVPIDIK
0401: VEIRSKVVVI SGPNTGGKTA LLKTLGLVSL MSKSGMYLPA KNRPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL NIASENSLVL LDEICSGTDP
0501: SEGVALATSI LRYIKNRVNV AVVSTHYGDL SRLKDNETQF QNAAMEFSME TLQPTFRVLW GSTGESNALR VAKSIGFNGR ILENAHEWRE RLKPEQEVER
0601: KGSLFQSLVE ERNKLNLQAS KAAALHRDLM NLHRELEHES RDLEKREKAL FKKETQKVQE DLSSAKSKMQ KLVAEFESQL ETDTYGIIKP PILYQYQRKG
0701: RKSKVVVISG PNTGGKTALL KTLGLISLMS KSGMYLPAKN RPRLPWFDLI LADIGDPQSL EQSLSTFSGH ISRIRQILNI ASENSLVLLD EICSGTDPSE
0801: GVALATSILR YIKNRVNVAV VSTHYGDLSR LKDNETQFQN AAMEFSMETL QPTFRVLWGS TGESNALRVA KSIGFDGRIL EHAHEWRERL KPEQEVERKG
0901: SLFQSLVEER NKLNLQASKA AALHRDLMNL YRELEHESRD LEKREKALFK KETQKVQEDL SSAKSKMQKL VAEFEKTVTA DQYNSLILKT EEAVADIIED
1001: YCPKDLLLTE EEGYSDYSPQ AGEKVIVTGL GGKLGTVVEE PGDDETVLVQ QGKMRVRVNR KDIAPLPRTK TTETPNRSLR SKRQVSMKEL GSVLQMQSEP
1101: VRIQTSKNTL DLRGMRVEEA IYQLDMAVSG RESGSILFII HGMGTGVIKE LVLQRLSKNS RVSRYEQANP MNHGCTVAYI K

Best Arabidopsis Sequence Match ( AT1G65070.4 )
(BLAST)

001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRK I

Arabidopsis Description

DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.