Factsheet for Bra022497.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91525	Canola	plastid	96.95	96.84
AT1G65070.2	Thale cress	plastid	81.26	82.19
CDY16386	Canola	plastid	96.84	72.65
PGSC0003DMT400057653	Potato	plastid	41.99	53.76
Solyc02g078390.2.1	Tomato	plastid	53.16	51.93
KRH50031	Soybean	plastid	52.48	50.88
KRH20465	Soybean	cytosol	11.06	48.28
Zm00001d001806_P001	Maize	plastid	47.29	46.5
EES11666	Sorghum	plastid	47.86	46.49
GSMUA_Achr7P04320_001	Banana	plastid	47.74	46.48
TraesCS2D01G565200.1	Wheat	plastid	46.84	45.26
TraesCS2A01G588000.2	Wheat	plastid	46.5	44.98
TraesCS2B01G595200.1	Wheat	endoplasmic reticulum, plastid, vacuole	46.5	44.88
HORVU2Hr1G118740.5	Barley	plastid	42.78	43.41
Os04t0680700-01	Rice	plastid	23.36	41.65
Bra022693.1-P	Field mustard	plastid	24.27	26.81
Bra028327.1-P	Field mustard	extracellular, vacuole	3.61	19.39
Bra001709.1-P	Field mustard	nucleus	12.53	11.85
Bra021052.1-P	Field mustard	cytosol	10.05	11.24
Bra015033.1-P	Field mustard	mitochondrion	13.77	10.87
Bra035777.1-P	Field mustard	cytosol	9.26	9.7
Bra028373.1-P	Field mustard	mitochondrion, plastid	11.96	9.56
Bra019156.1-P	Field mustard	plastid	11.63	9.5
Bra000896.1-P	Field mustard	plastid	14.0	9.27
Bra035922.1-P	Field mustard	cytosol	0.79	4.14
Bra035923.1-P	Field mustard	cytosol	0.68	3.92
Bra035921.1-P	Field mustard	cytosol	1.13	2.67

Protein Annotations

Gene3D:3.30.1370.110	Gene3D:3.40.50.300	MapMan:35.2	EnsemblPlantsGene:Bra022497	EnsemblPlants:Bra022497.1	EnsemblPlants:Bra022497.1-P
ncoils:Coil	InterPro:DNA_mismatch_repair_MutS_C	InterPro:DNA_mismatch_repair_MutS_core	InterPro:DNA_mismatch_repair_MutS_sf	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006298	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0016887	GO:GO:0030983	GO:GO:0045910	GO:GO:0090305	InterPro:IPR002625
UniProt:M4E149	InterPro:MutS2	InterPro:P-loop_NTPase	PFAM:PF00488	PFAM:PF01713	PIRSF:PIRSF005814
ScanProsite:PS00486	PFscan:PS50828	PANTHER:PTHR11361	PANTHER:PTHR11361:SF14	SMART:SM00463	SMART:SM00533
SMART:SM00534	SUPFAM:SSF160443	SUPFAM:SSF48334	SUPFAM:SSF52540	InterPro:Smr_dom	InterPro:Smr_dom_sf
UniParc:UPI0002545773	SEG:seg	:	:	:	:

Description

AT1G65070 (E=6e-296) | DNA mismatch repair MutS family protein

Coordinates

chrA02:-:9423523..9426993

Molecular Weight (calculated)

97974.2 Da

IEP (calculated)

7.764

GRAVY (calculated)

-0.255

Length

886 amino acids

Sequence
(BLAST)

001: MNTLSLHLLI PTAIHLRSSR AASPSFPRAS SPSSLRITSS SILRADDSQS IESQTLEVLE WRALCNQLSP FASTSMGLSA TKTADIPVGN SPEESRSLLD
101: ETAAALAAME AMEPRRLGLS EILDLSEIVE RAMAGQLLTL RELCAVRGTL MAASSGFEKL RRAANSDKRV TPLVKILEGC DFKTTLEHKI GFCIDSNTSV
201: ILDRASEDLE IIRSERKRNM ETLDSLLKKV STKIYRAGGI DRPTVTKRRS RMCVAIRAIR KRLLPGGVVL SVSSSGATCY MEPKEAVELN NMEVRHAYSE
301: KAEEMAILSI LTSEVSAAQR GILHLLDRIL QLDVAFARAS HAKWMNGVYP KLTKTLDMDD GDCTSLAVDI DSVQHPLLLG SVLGSSPNSG SLFPVPIDIK
401: VESRSKVVVI SGPNTGGKTA LLKTLGLVSL MSKSGMYLPA KNRPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL NIASENSLVL LDEICSGTDP
501: SEGVALATSI LRYIKNRVNV AVVSTHYGDL SRLKDNETRF QNAAMEFSME TLQPTFRVLW GSTGESNALR VAKSIGFNGR ILENAHEWRE RLKPEQEVER
601: KGSLFQSLVE ERIKLNLQAT KAAALHRDLM NLYRELEHES RDLEKREKAL LKKETQKVQE DLISAKSKMQ KLAAEFESQL ETVTADEYNS LILKTEEAVA
701: DIIEDYCPKD LLLTEEEGYS DYSPQAGEKV IVTGLGGKLG TVVEEPGDDE TVLVQQGKMR VRVNRKDIAP LPRTKTTETP NRSLRSKRQV SMKELGSVLQ
801: MQSEPVRIQT SKNTLDLRGM RVEEAIYQLD MAVSGRESGS ILFIIHGMGT GVIKELVLER LSRHSRVSRY EQANPMNHGC TVAYIK

Best Arabidopsis Sequence Match ( AT1G65070.2 )
(BLAST)

001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK

Arabidopsis Description

DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.