Factsheet for HORVU2Hr1G118740.5

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G565200.1	Wheat	plastid	86.37	82.22
TraesCS2B01G595200.1	Wheat	endoplasmic reticulum, plastid, vacuole	85.91	81.7
TraesCS2A01G588000.2	Wheat	plastid	85.68	81.66
EES11666	Sorghum	plastid	69.76	66.78
Zm00001d001806_P001	Maize	plastid	68.73	66.59
Os04t0680700-01	Rice	plastid	32.76	57.55
GSMUA_Achr7P04320_001	Banana	plastid	53.95	51.76
Solyc02g078390.2.1	Tomato	plastid	48.22	46.42
AT1G65070.2	Thale cress	plastid	44.33	44.18
CDX91525	Canola	plastid	43.87	43.18
Bra022497.1-P	Field mustard	plastid	43.41	42.78
CDY16386	Canola	plastid	43.64	32.26
HORVU1Hr1G047640.7	Barley	plastid	21.65	21.65
HORVU6Hr1G000990.1	Barley	cytosol	2.41	13.73
HORVU6Hr1G001030.1	Barley	cytosol	2.41	13.73
PGSC0003DMT400001555	Potato	cytosol	3.09	13.71
HORVU1Hr1G066830.9	Barley	cytosol	8.59	11.87
HORVU2Hr1G031870.17	Barley	cytosol	10.08	10.68
HORVU2Hr1G085940.21	Barley	cytosol	10.42	10.42
HORVU1Hr1G030930.22	Barley	plastid	11.0	9.63
HORVU5Hr1G061020.11	Barley	endoplasmic reticulum, golgi, plasma membrane	11.23	9.48
HORVU2Hr1G087660.5	Barley	plastid	11.68	8.7
KRH33415	Soybean	cytosol, extracellular, plastid	0.34	2.44
KRG88725	Soybean	nucleus	0.34	1.05

Protein Annotations

Gene3D:3.30.1370.110	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287JMR0	ncoils:Coil	InterPro:DNA_mismatch_repair_MutS_C
InterPro:DNA_mismatch_repair_MutS_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006259
GO:GO:0006298	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0016887	GO:GO:0030983	GO:GO:0045910	GO:GO:0090305	EnsemblPlantsGene:HORVU2Hr1G118740	EnsemblPlants:HORVU2Hr1G118740.5
InterPro:IPR002625	InterPro:MutS2	InterPro:P-loop_NTPase	PFAM:PF00488	PFAM:PF01713	PIRSF:PIRSF005814
ScanProsite:PS00486	PFscan:PS50828	PANTHER:PTHR11361	PANTHER:PTHR11361:SF14	SMART:SM00463	SMART:SM00534
SUPFAM:SSF160443	SUPFAM:SSF48334	SUPFAM:SSF52540	InterPro:Smr_dom	InterPro:Smr_dom_sf	UniParc:UPI000B475EB5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:743214887..743219018

Molecular Weight (calculated)

87029.3 Da

IEP (calculated)

6.196

GRAVY (calculated)

-0.234

Length

873 amino acids

Sequence
(BLAST)

001: AFQLPPPSPA GSGDLPLPLP FRRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG
101: RLLAVREICG VGRSLQAARE VFDQVKTIAE EMPDGRYSPL LDILQGCDFL TELVKMIEFC LDSNLSMVLD RASERLGTIR KERRMNVDML EALLRETSVM
201: IFQAGGADSP VVTKRRSRMC VGVKASHKHL VPGGIVLSSS GSGATYFMEP RDAVKLNNTE VKLSGDERAE ELAVLGLLTS RIADSRTKIR HLMGKILELD
301: LACARGSYAL WINGVRPAFS DRDNTSESDP SAPLFIEGIR HPLLLEQSLG TAEESATTEA TEVGKEQLSE DQPVPAMPVP LDMHVKNDTR IVVISGPNTG
401: GKTATMKTLG LASLMSKAGM FFPAKGRPRL PWFDQVLADI GDHQSLENSL STFSGNISRL RKIAQVVSTD SLVLIDEIGS GTDPSEGVSL STSILKYLAS
501: RLNLAVVTTH YADLSRLKAV DDRFENAAME FCLETLKPTY RVLWGSTGNS NALSIAKSIG FDQKVLDRAQ EWVEKLLPDK QKERQGLLYG SLLDERNLLE
601: SQANEVASVL SEVEDLYNEI RLEADELDSR VAALKARESQ KVQQELKSVK SQMDLLIKNF EVQLKNSKLE QYNSVMRKAE AATASLAAAH QPTEFAVSDD
701: ENKSSYVPQI GDKVYVEGLG GGSMATVVEI LSEDGSCMVQ YGKIKVRAKN NKMKLAQRDR KETSTSSSAQ GKGRAQKRSP AGTATTGSVS FAPAVQTSRN
801: TVDLRGMRVG EASHELEMAI DGCRPYQVLF VVHGMGTGAV KECALDVLRS HPRVVRIEDE SPLNYGCTVA YVE

Best Arabidopsis Sequence Match ( AT1G65070.2 )
(BLAST)

001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK

Arabidopsis Description

DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.