Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G179700.1 | Wheat | plastid | 91.87 | 96.39 |
| TraesCS1D01G178000.1 | Wheat | plastid | 91.64 | 96.15 |
| TraesCS1B01G200700.1 | Wheat | plastid | 91.18 | 96.14 |
| Os10t0509000-01 | Rice | cytosol, nucleus | 50.86 | 81.92 |
| OQU91528 | Sorghum | plastid | 73.65 | 77.38 |
| GSMUA_Achr1P01790_001 | Banana | mitochondrion | 18.21 | 71.3 |
| Zm00001d013887_P002 | Maize | plastid | 68.73 | 70.34 |
| GSMUA_Achr1P01810_001 | Banana | extracellular, plasma membrane | 20.62 | 56.43 |
| VIT_16s0098g00680.t01 | Wine grape | cytosol, plastid | 47.42 | 50.61 |
| KRH72584 | Soybean | plastid | 44.79 | 49.49 |
| KRH16965 | Soybean | cytosol, mitochondrion, nucleus, plastid | 30.01 | 48.43 |
| Solyc03g080010.2.1 | Tomato | plastid | 45.48 | 48.06 |
| AT5G54090.1 | Thale cress | plastid | 43.18 | 47.36 |
| CDY41773 | Canola | plastid | 42.5 | 46.32 |
| Bra022693.1-P | Field mustard | plastid | 42.15 | 45.89 |
| CDY28796 | Canola | plastid | 42.15 | 45.89 |
| GSMUA_Achr1P01820_001 | Banana | plastid | 11.34 | 42.13 |
| KRH16964 | Soybean | cytosol, nucleus | 6.99 | 36.75 |
| HORVU2Hr1G118740.5 | Barley | plastid | 21.65 | 21.65 |
| HORVU6Hr1G001030.1 | Barley | cytosol | 2.75 | 15.69 |
| HORVU6Hr1G000990.1 | Barley | cytosol | 2.75 | 15.69 |
| HORVU1Hr1G066830.9 | Barley | cytosol | 9.62 | 13.29 |
| HORVU2Hr1G031870.17 | Barley | cytosol | 9.97 | 10.56 |
| HORVU2Hr1G085940.21 | Barley | cytosol | 10.42 | 10.42 |
| HORVU1Hr1G030930.22 | Barley | plastid | 11.34 | 9.93 |
| HORVU2Hr1G087660.5 | Barley | plastid | 13.06 | 9.72 |
| HORVU5Hr1G061020.11 | Barley | endoplasmic reticulum, golgi, plasma membrane | 11.0 | 9.28 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287FFL7 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_sf |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0030983 | GO:GO:0045910 | GO:GO:0090305 | EnsemblPlantsGene:HORVU1Hr1G047640 | EnsemblPlants:HORVU1Hr1G047640.7 | InterPro:MutS2 |
| InterPro:P-loop_NTPase | PFAM:PF00488 | PIRSF:PIRSF005814 | ScanProsite:PS00486 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF81 |
| SMART:SM00534 | SUPFAM:SSF48334 | SUPFAM:SSF52540 | UniParc:UPI000B47F37A | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:+:352060714..352077592
Molecular Weight (calculated)
95492.9 Da
IEP (calculated)
7.478
GRAVY (calculated)
-0.209
Length
873 amino acids
Sequence
(BLAST)
(BLAST)
001: VQVWLAAEKP SAVRSPTPLQ PSSIRTHRRR LPLPATALLH GSSMLRLSAS ISLHYPPSLS PSVSQPRPRR LRALVVAASA SPSARSLRLL EWGKVCRAVA
101: SFAGTVHGRE ATELWGVEDV SYERSRKLLR ETEAAVRLLG SSGGALDFSG LDTVAVESAI NCVSGGSVIK GQEAMAVVSL MLFVESLQVT IKAAMKQDED
201: SHNLLLPLTE TILDAVVSKP LVKSIQDVID DDGSVKDTAS PELRRYRDQV QALESRLCQL MDKLIRNADN EASLSEVSIV NGRCCIKITG DKSSSFDGLL
301: LSSGSDSGSM IEPIVAIPLN DELQGARALV VRAELEALSK LTDKILLELD NIQILMQETV TLDKVTARAR YSIAYDGTLP DLYLPNIVHG IVNAAKDGPA
401: GTTSSSQVTK RPWKLFIPNA YHPLLLQQHQ ENLRRTKKDV ASATSEIRRR RIYGQDIADE DQLASELDFM KIRVSELERN HPIPVDFMIA EETTVLVITG
501: PNTGGKTISL KTVGLASLMA KIGLYILASE PVKIPWFDAV YADIGDEQSL TQSLSTFSGH LKQIGAIRAQ STSQSLVLLD EVGAGTNPLE GAALGMSLLE
601: SFAEAGSFLT LATTHHGELK TLKYSNDSFE NACVEFDEEN LKPTFRILWG IPGRSNAINI AERLGLPLDI IESARQLLGT AGAEINALIM DMEKFKQEYH
701: EQLQQAQHYL MQSKELHNDL EVAQKSIVDH STAQRKRKLR VVSEYAVMAR SIIHKKFQQY RESAVAQRVL EEEKAAEKAK SEGAKGPEPS STSALKKTQN
801: TNSSMVTKAN GKIIDEDGGI PEVGDLVYVP KLKNQATVVK IDPSKNEVQV QAGMMKLKLK LKDVKVQKQR TSR
101: SFAGTVHGRE ATELWGVEDV SYERSRKLLR ETEAAVRLLG SSGGALDFSG LDTVAVESAI NCVSGGSVIK GQEAMAVVSL MLFVESLQVT IKAAMKQDED
201: SHNLLLPLTE TILDAVVSKP LVKSIQDVID DDGSVKDTAS PELRRYRDQV QALESRLCQL MDKLIRNADN EASLSEVSIV NGRCCIKITG DKSSSFDGLL
301: LSSGSDSGSM IEPIVAIPLN DELQGARALV VRAELEALSK LTDKILLELD NIQILMQETV TLDKVTARAR YSIAYDGTLP DLYLPNIVHG IVNAAKDGPA
401: GTTSSSQVTK RPWKLFIPNA YHPLLLQQHQ ENLRRTKKDV ASATSEIRRR RIYGQDIADE DQLASELDFM KIRVSELERN HPIPVDFMIA EETTVLVITG
501: PNTGGKTISL KTVGLASLMA KIGLYILASE PVKIPWFDAV YADIGDEQSL TQSLSTFSGH LKQIGAIRAQ STSQSLVLLD EVGAGTNPLE GAALGMSLLE
601: SFAEAGSFLT LATTHHGELK TLKYSNDSFE NACVEFDEEN LKPTFRILWG IPGRSNAINI AERLGLPLDI IESARQLLGT AGAEINALIM DMEKFKQEYH
701: EQLQQAQHYL MQSKELHNDL EVAQKSIVDH STAQRKRKLR VVSEYAVMAR SIIHKKFQQY RESAVAQRVL EEEKAAEKAK SEGAKGPEPS STSALKKTQN
801: TNSSMVTKAN GKIIDEDGGI PEVGDLVYVP KLKNQATVVK IDPSKNEVQV QAGMMKLKLK LKDVKVQKQR TSR
001: MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:F4JYU0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.