Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P01790_001 | Banana | mitochondrion | 27.86 | 67.71 |
| OQU91528 | Sorghum | plastid | 82.47 | 53.79 |
| TraesCS1B01G200700.1 | Wheat | plastid | 82.1 | 53.74 |
| TraesCS1D01G178000.1 | Wheat | plastid | 82.29 | 53.61 |
| TraesCS1A01G179700.1 | Wheat | plastid | 82.29 | 53.61 |
| HORVU1Hr1G047640.7 | Barley | plastid | 81.92 | 50.86 |
| Zm00001d013887_P002 | Maize | plastid | 76.2 | 48.42 |
| GSMUA_Achr1P01810_001 | Banana | extracellular, plasma membrane | 23.62 | 40.13 |
| VIT_16s0098g00680.t01 | Wine grape | cytosol, plastid | 53.32 | 35.33 |
| Solyc03g080010.2.1 | Tomato | plastid | 52.58 | 34.5 |
| KRH72584 | Soybean | plastid | 49.08 | 33.67 |
| AT5G54090.1 | Thale cress | plastid | 48.89 | 33.29 |
| KRH16964 | Soybean | cytosol, nucleus | 10.15 | 33.13 |
| CDY41773 | Canola | plastid | 48.71 | 32.96 |
| CDY28796 | Canola | plastid | 48.52 | 32.79 |
| Bra022693.1-P | Field mustard | plastid | 48.34 | 32.67 |
| KRH16965 | Soybean | cytosol, mitochondrion, nucleus, plastid | 29.89 | 29.94 |
| Os04t0680700-01 | Rice | plastid | 10.7 | 11.67 |
| Os07t0486000-02 | Rice | cytosol | 12.73 | 8.65 |
| Os05t0498300-01 | Rice | cytosol | 12.55 | 8.41 |
| Os05t0274200-01 | Rice | cytosol | 11.25 | 6.48 |
| Os04t0507000-01 | Rice | mitochondrion | 13.28 | 6.36 |
| Os01t0180600-01 | Rice | mitochondrion, nucleus | 13.65 | 6.05 |
| Os04t0682900-01 | Rice | plastid | 1.48 | 0.93 |
| Os04t0683100-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
| Os09t0407600-01 | Rice | mitochondrion, nucleus, plastid | 0.0 | 0.0 |
| Os04t0682800-01 | Rice | plasma membrane | 0.0 | 0.0 |
| GSMUA_Achr1P01820_001 | Banana | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0P0XWQ1 | ProteinID:BAT11599.1 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003684 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 | GO:GO:0006950 | GO:GO:0008094 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0030983 |
| GO:GO:0032300 | GO:GO:0045910 | GO:GO:0090305 | EnsemblPlantsGene:Os10g0509000 | EnsemblPlants:Os10t0509000-01 | InterPro:P-loop_NTPase |
| PFAM:PF00488 | ScanProsite:PS00486 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF81 | SMART:SM00534 | SUPFAM:SSF52540 |
| UniParc:UPI0000DD9A2F | SEG:seg | : | : | : | : |
Description
Similar to MutS domain V family protein, expressed. (Os10t0509000-01)
Coordinates
chr10:+:19543841..19549093
Molecular Weight (calculated)
60138.4 Da
IEP (calculated)
8.533
GRAVY (calculated)
-0.298
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: RALVAKAELD ALSKMTDKIL LELDNIRILL QATVELDKVA ARAKYSIAYD GTYPDLYLPN FVNGTVSTAT GGSISTISSA HLSKKAWKLC MPNAYHPLLL
101: QQHQENLHRA KKDVASATAE IRRRRIYGQD NVEEDQLASD LDLMKIRVSQ MEKDRPVPVD FFIAEGTTVL VITGPNTGGK TISLKTVGLA SLMAKIGLYI
201: LASEPVKIPW FNAVYADIGD EQSLTQSLST FSGHLKQIGA IRAWSTSQSL VLLDEVGAGT NPLEGAALGM SLLESFAEAG SFLTLATTHH GELKTLKYSN
301: DLFENACMEF DEDNLKPTFR ILWGIPGRSN AINIAERLGL PSDIIESSRQ LLGTAGAEIN ALIMDMENFK QQYQHHLQEA QYYVMQSKEL HNNLEVAQKN
401: IIDHTSAQRK RKARVISEYA VMARSIIRKK FQQFRESAIA KRVLEEEKAV QNDKPERLKD PEPTSTPAVK KAQNTNISMA TTTEGEDNGI PEVGDLVYVP
501: KLKNEATVVK IDSSKNEVQV QAGIMKLKLK FKDVKIQKRI SR
101: QQHQENLHRA KKDVASATAE IRRRRIYGQD NVEEDQLASD LDLMKIRVSQ MEKDRPVPVD FFIAEGTTVL VITGPNTGGK TISLKTVGLA SLMAKIGLYI
201: LASEPVKIPW FNAVYADIGD EQSLTQSLST FSGHLKQIGA IRAWSTSQSL VLLDEVGAGT NPLEGAALGM SLLESFAEAG SFLTLATTHH GELKTLKYSN
301: DLFENACMEF DEDNLKPTFR ILWGIPGRSN AINIAERLGL PSDIIESSRQ LLGTAGAEIN ALIMDMENFK QQYQHHLQEA QYYVMQSKEL HNNLEVAQKN
401: IIDHTSAQRK RKARVISEYA VMARSIIRKK FQQFRESAIA KRVLEEEKAV QNDKPERLKD PEPTSTPAVK KAQNTNISMA TTTEGEDNGI PEVGDLVYVP
501: KLKNEATVVK IDSSKNEVQV QAGIMKLKLK FKDVKIQKRI SR
001: MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:F4JYU0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.