Factsheet for Os04t0680700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	mitochondrion, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G595200.1	Wheat	endoplasmic reticulum, plastid, vacuole	76.06	41.18
TraesCS2A01G588000.2	Wheat	plastid	75.45	40.94
TraesCS2D01G565200.1	Wheat	plastid	75.25	40.79
EES11666	Sorghum	plastid	68.61	37.39
Zm00001d001806_P001	Maize	plastid	66.2	36.52
HORVU2Hr1G118740.5	Barley	plastid	57.55	32.76
GSMUA_Achr7P04320_001	Banana	plastid	51.71	28.24
Solyc02g078390.2.1	Tomato	plastid	45.47	24.92
CDX91525	Canola	plastid	42.25	23.68
AT1G65070.2	Thale cress	plastid	41.65	23.63
Bra022497.1-P	Field mustard	plastid	41.65	23.36
CDY16386	Canola	plastid	42.05	17.7
Os10t0509000-01	Rice	cytosol, nucleus	11.67	10.7
Os05t0274200-01	Rice	cytosol	12.68	6.69
Os07t0486000-02	Rice	cytosol	10.26	6.39
Os05t0498300-01	Rice	cytosol	9.86	6.06
Os09t0407600-01	Rice	mitochondrion, nucleus, plastid	7.24	5.06
Os04t0682900-01	Rice	plastid	8.45	4.89
KRH33415	Soybean	cytosol, extracellular, plastid	1.21	4.88
Os01t0180600-01	Rice	mitochondrion, nucleus	11.87	4.82
Os04t0507000-01	Rice	mitochondrion	10.66	4.68
KRG88725	Soybean	nucleus	1.61	2.81
Os04t0682800-01	Rice	plasma membrane	0.0	0.0
Os04t0683100-01	Rice	cytosol, nucleus	0.0	0.0
PGSC0003DMT400001555	Potato	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.2	ProteinID:BAF16201.1	ProteinID:BAS91669.1	InterPro:DNA_mismatch_repair_MutS_core	InterPro:DNA_mismatch_repair_MutS_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003684	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006259	GO:GO:0006298	GO:GO:0006950	GO:GO:0008094
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	GO:GO:0030983
GO:GO:0032300	GO:GO:0045910	GO:GO:0090305	InterPro:MutS2	EnsemblPlantsGene:Os04g0680700	EnsemblPlants:Os04t0680700-01
InterPro:P-loop_NTPase	PANTHER:PTHR11361	PANTHER:PTHR11361:SF14	UniProt:Q0J8Y6	SMART:SM00533	SUPFAM:SSF48334
SUPFAM:SSF52540	UniParc:UPI0000DD9350	SEG:seg	:	:	:

Description

DNA mismatch repair protein MutS, core domain containing protein. (Os04t0680700-01);Similar to H0901F07.7 protein. (Os04t0680700-02)

Coordinates

chr4:+:34751498..34756030

Molecular Weight (calculated)

53000.2 Da

IEP (calculated)

7.698

GRAVY (calculated)

0.019

Length

497 amino acids

Sequence
(BLAST)

001: MAAAAAAAAA KPNLLLPVSV AIPSSRVSLP TGLVCSARSP PPRLRAAAAA AAASQALTSP VAAETPEAKQ MRVETEAALE WGGVCARLAG FASTAAGRAA
101: CGEGRVPVGR SREESERLLE QTAAAALLPA PLDFGGVEDV SAAIAAAAGA RLLAVREICG VGRSIRAARR VFDQLKTLSE ETPDGRSYTP LLDIMQDCDF
201: LTELVQRIEF CLDYTLSVVL DRASDKLATI RKERRKNIDM LESLLRDTST KIFQGGGIDS PVVTKRRSRM CVGVKASHKH LVPGGIVLSS SGSGATYFME
301: PRDAIRLNNM EVKLSGDERA EELAILGLLT SSIADSEMKI RHLMGKILEL DLACARGSYA LWINAVRPAF TDRDSDTQLN PNSECSVFIE GIQHPLLLEQ
401: SLSMVKESTR VGKGQLSDEH LVSPMPIPLD MQVRNDTRII VISGPNTGGK TATMKTLGLA SLMSKAGMFF PAKGTPRLPW FDQVLADIGD HQVVSVF

Best Arabidopsis Sequence Match ( AT1G65070.3 )
(BLAST)

001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHEVFKNV VLLILLISCN VCFCS

Arabidopsis Description

DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.