Factsheet for GSMUA_Achr7P04320_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G565200.1	Wheat	plastid	57.58	57.14
TraesCS2A01G588000.2	Wheat	plastid	57.14	56.77
EES11666	Sorghum	plastid	56.81	56.69
TraesCS2B01G595200.1	Wheat	endoplasmic reticulum, plastid, vacuole	57.14	56.64
Zm00001d001806_P001	Maize	plastid	55.27	55.83
KRH20465	Soybean	cytosol	12.2	54.68
HORVU2Hr1G118740.5	Barley	plastid	51.76	53.95
KRH50031	Soybean	plastid	52.53	52.3
PGSC0003DMT400057653	Potato	plastid	39.34	51.73
Os04t0680700-01	Rice	plastid	28.24	51.71
Solyc02g078390.2.1	Tomato	plastid	50.77	50.94
AT1G65070.2	Thale cress	plastid	46.48	48.29
CDX91525	Canola	plastid	46.7	47.91
Bra022497.1-P	Field mustard	plastid	46.48	47.74
GSMUA_Achr1P01790_001	Banana	mitochondrion	9.01	36.77
CDY16386	Canola	plastid	46.48	35.82
GSMUA_Achr1P01810_001	Banana	extracellular, plasma membrane	7.14	20.38
GSMUA_Achr1P01820_001	Banana	plastid	5.16	20.0
GSMUA_Achr6P13480_001	Banana	cytosol	5.05	17.9
GSMUA_Achr1P01780_001	Banana	nucleus	3.63	17.84
GSMUA_Achr6P29480_001	Banana	cytosol	6.37	15.63
GSMUA_Achr8P12780_001	Banana	cytosol, nucleus, plasma membrane	8.57	13.02
GSMUA_Achr8P08020_001	Banana	cytosol	6.59	12.15
GSMUA_AchrUn_...	Banana	nucleus	7.8	10.26
GSMUA_Achr5P24510_001	Banana	nucleus, plastid	12.31	8.78
GSMUA_Achr7P13290_001	Banana	cytosol, plastid	10.44	8.53
GSMUA_Achr6P13490_001	Banana	cytosol	5.27	7.28
GSMUA_Achr8P12760_001	Banana	cytosol	1.32	6.38
GSMUA_Achr8P12770_001	Banana	extracellular, nucleus, plasma membrane	1.43	5.73
GSMUA_AchrUn_...	Banana	plastid	1.98	4.79
GSMUA_Achr8P08030_001	Banana	cytosol	1.54	4.7
GSMUA_Achr6P29470_001	Banana	mitochondrion	1.65	3.35

Protein Annotations

Gene3D:3.30.1370.110	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:DNA_mismatch_repair_MutS_C	InterPro:DNA_mismatch_repair_MutS_core
InterPro:DNA_mismatch_repair_MutS_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006298	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	GO:GO:0030983
GO:GO:0045910	GO:GO:0090305	EnsemblPlantsGene:GSMUA_Achr7G04320_001	EnsemblPlants:GSMUA_Achr7P04320_001	EnsemblPlants:GSMUA_Achr7T04320_001	InterPro:IPR002625
UniProt:M0TEM2	InterPro:MutS2	InterPro:P-loop_NTPase	PFAM:PF00488	PFAM:PF01713	PIRSF:PIRSF005814
ScanProsite:PS00486	PFscan:PS50828	PANTHER:PTHR11361	PANTHER:PTHR11361:SF14	SMART:SM00463	SMART:SM00533
SMART:SM00534	SUPFAM:SSF160443	SUPFAM:SSF48334	SUPFAM:SSF52540	InterPro:Smr_dom	InterPro:Smr_dom_sf
UniParc:UPI000295CCD4	SEG:seg	:	:	:	:

Description

Putative MutS2 protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G04320_001]

Coordinates

chr7:+:3315800..3320977

Molecular Weight (calculated)

100623.0 Da

IEP (calculated)

5.997

GRAVY (calculated)

-0.240

Length

910 amino acids

Sequence
(BLAST)

001: MEAFNSFVRF KEPPNLFFSR DDTVSASKNA GVSKPTSIRA ANSVSSVGKS TRVSKTFQGK PKFAAISISP RKSRIGAGLA ADAERVRIRE ELRRETEETL
101: EWGSVCSQVS AFVSTSVGRA LCRSGNLPVG RDREESEKLL DQTAAAVLLP RPLDFSGIDD VSEIVRAAVA GELLGIRELC AIERSLQSAR RVFEQLEQIS
201: ADESSDRYTS LLEILQDCDF LVELANQIAF CIDGKLSIVL DQASMKLESI RMERRKNMEK LESFLKEVSM KVFQSGGIDS PLVTKRRSRM CVGIKASHKS
301: LLPEGIVLSS SSSGATYFIE PRDAIELNNM EVRLFNDEKA EELAILGVLT SEIAHAETKI RYLMEKILEL DLAVARGAYA LWNGGVRPYL IQDYESSILF
401: DRRNLSIDSE EFLEVEPPVP VDFKIENSTK VVVISGPNTG GKTATMKTLG LASIMSKAGM FLSARDQPKL PWFDQILADI GDHQSLEHNL STFSGHISRI
501: CKITEVASEN SLVLIDEIGS GTDPSEGVAL STCILRYLAD HANLSVVTTH YADLSRLKSG DSRFENAAME FCLETLQPTF RILWGSTGNS NALSIAKSIG
601: FDQKMLDRAE EWVKKLEPDR ERERQGSLYQ SLLEERNLLE AQANEAALVL EEVKKLHSEI QSEAEDIDKR VAALKAKESH LVQQELKIVK SKMDSIIEDF
701: ESRIQSATLD QFSSIMRESE TAIASIVAAH SPKDDMSYVS TESGSSYLPQ IGDQVYVTGL GDKVATVVAA PAEDGTTTVQ YGKIKVRVKR NDMRLVQSSS
801: GRHNSALQPR GQVCKKDLYQ TLVCLSELLQ IRRTSKNTVD LRGKRVEEAS HRLQMAILGC KSRGVLFIVH GTGTGAVKEC VLEVLRNHPR VAKFEEESPM
901: NYGCTVAYIK

Best Arabidopsis Sequence Match ( AT1G65070.2 )
(BLAST)

001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK

Arabidopsis Description

DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.