Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P13480_001 | Banana | cytosol | 13.51 | 9.73 |
| GSMUA_Achr1P01790_001 | Banana | mitochondrion | 9.73 | 8.07 |
| CDX86902 | Canola | cytosol | 4.86 | 7.26 |
| GSMUA_Achr8P08020_001 | Banana | cytosol | 12.43 | 4.66 |
| GSMUA_Achr6P29480_001 | Banana | cytosol | 8.65 | 4.31 |
| GSMUA_Achr8P12780_001 | Banana | cytosol, nucleus, plasma membrane | 12.43 | 3.84 |
| GSMUA_Achr7P04320_001 | Banana | plastid | 17.84 | 3.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.97 | 3.47 |
| GSMUA_Achr5P24510_001 | Banana | nucleus, plastid | 20.54 | 2.98 |
| GSMUA_Achr7P13290_001 | Banana | cytosol, plastid | 16.76 | 2.78 |
| GSMUA_Achr1P01810_001 | Banana | extracellular, plasma membrane | 4.32 | 2.51 |
| GSMUA_Achr6P13490_001 | Banana | cytosol | 4.86 | 1.37 |
| GSMUA_Achr8P08030_001 | Banana | cytosol | 2.16 | 1.34 |
| GSMUA_Achr8P12760_001 | Banana | cytosol | 1.08 | 1.06 |
| GSMUA_Achr6P29470_001 | Banana | mitochondrion | 2.16 | 0.89 |
| GSMUA_Achr8P12770_001 | Banana | extracellular, nucleus, plasma membrane | 1.08 | 0.88 |
| GSMUA_Achr1P01820_001 | Banana | plastid | 1.08 | 0.85 |
| GSMUA_AchrUn_... | Banana | plastid | 1.08 | 0.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P01780_001 | EnsemblPlants:GSMUA_Achr1T01780_001 | EnsemblPlantsGene:GSMUA_Achr1G01780_001 | SEG:seg | UniParc:UPI0002950179 | UniProt:M0RW86 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_98.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G01780_001]
Coordinates
chr1:-:1450031..1452290
Molecular Weight (calculated)
20659.9 Da
IEP (calculated)
10.301
GRAVY (calculated)
-0.523
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVIVDMERF KQSFQEHLQE AEHYLMLSKE LRESLLVAKK KIADHAVKLK NRKTRAVLDS ASVARSLLRS KLLQQQLQFR ESSEVESEKG RVVSSRQSAE
101: DLEQSKSCDI SPGGRSLSSE ASKAAGVDEQ SKIPVAGDMV HVPSLGMQVV VSKVEETKGE IIVQAGNMKL RLKLKDIQSR RSRTS
101: DLEQSKSCDI SPGGRSLSSE ASKAAGVDEQ SKIPVAGDMV HVPSLGMQVV VSKVEETKGE IIVQAGNMKL RLKLKDIQSR RSRTS
001: MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:F4JYU0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.