Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G565200.1 | Wheat | plastid | 95.52 | 95.42 |
| TraesCS2B01G595200.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 94.87 | 94.66 |
| HORVU2Hr1G118740.5 | Barley | plastid | 81.66 | 85.68 |
| Os04t0680700-01 | Rice | plastid | 40.94 | 75.45 |
| EES11666 | Sorghum | plastid | 74.78 | 75.11 |
| Zm00001d001806_P001 | Maize | plastid | 73.69 | 74.92 |
| GSMUA_Achr7P04320_001 | Banana | plastid | 56.77 | 57.14 |
| Solyc02g078390.2.1 | Tomato | plastid | 50.33 | 50.83 |
| AT1G65070.2 | Thale cress | plastid | 45.52 | 47.6 |
| CDX91525 | Canola | plastid | 45.52 | 47.01 |
| Bra022497.1-P | Field mustard | plastid | 44.98 | 46.5 |
| CDY16386 | Canola | plastid | 45.41 | 35.22 |
| TraesCS1A01G179700.1 | Wheat | plastid | 24.34 | 26.8 |
| PGSC0003DMT400001555 | Potato | cytosol | 2.84 | 13.2 |
| TraesCS2A01G171900.1 | Wheat | cytosol | 10.37 | 11.73 |
| TraesCS1A01G135100.1 | Wheat | nucleus | 10.92 | 10.43 |
| TraesCS1A01G315900.1 | Wheat | cytosol | 9.06 | 10.15 |
| TraesCS2A01G362100.1 | Wheat | mitochondrion, nucleus | 12.45 | 10.11 |
| TraesCS5A01G206300.1 | Wheat | mitochondrion | 12.88 | 8.95 |
| TraesCS3A01G117500.1 | Wheat | mitochondrion, nucleus | 11.03 | 8.27 |
| KRH33415 | Soybean | cytosol, extracellular, plastid | 0.87 | 6.5 |
| KRG88725 | Soybean | nucleus | 0.98 | 3.16 |
Protein Annotations
| Gene3D:3.30.1370.110 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_core |
| InterPro:DNA_mismatch_repair_MutS_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0004518 | GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006298 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0016887 | GO:GO:0030983 | GO:GO:0045910 | InterPro:IPR002625 | InterPro:MutS2 | InterPro:P-loop_NTPase |
| PFAM:PF00488 | PFAM:PF01713 | PIRSF:PIRSF005814 | ScanProsite:PS00486 | PFscan:PS50828 | PANTHER:PTHR11361 |
| PANTHER:PTHR11361:SF14 | SMART:SM00463 | SMART:SM00533 | SMART:SM00534 | SUPFAM:SSF160443 | SUPFAM:SSF48334 |
| SUPFAM:SSF52540 | InterPro:Smr_dom | InterPro:Smr_dom_sf | EnsemblPlantsGene:TraesCS2A01G588000 | EnsemblPlants:TraesCS2A01G588000.2 | SEG:seg |
Description
No Description!
Coordinates
chr2A:+:777516897..777521586
Molecular Weight (calculated)
99357.0 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.208
Length
916 amino acids
Sequence
(BLAST)
(BLAST)
001: MATASAAAAN LYLRLPSTLP CTVSFPTRLS RIPRAPPRRL RTAASRTLAP PATSEVPEAE ELRLEAESAL EWDGVCARLA DFAATAAGRA ACGEGRVPVG
101: RSREESERLL EQTAAASLLT APLDFGGVGD VSAVVAAAAR GRLLAVREIC GVGRSLRAAR GVFDQVKRLA EEMPADGRYS SLLDILQGCD FLTELVKMIE
201: FCLDSNLSMV LDRASERLGA IRKERKMNVE MLESLLRDTS VKIFQAGGVD SPVVTKRRSR MCVGVKASHK HLVPGGIVLS SSGSGVTYFM EPRDAVKLNN
301: TEVKLSGDER AEELAVLGLL TSRIAESRMK IRHLMGKILE LDLACARGSY ALWINGVRPA FSDRDSSSES DPSGAYSVFI EGIQHPLLLE QSLGTVEELS
401: TEATEVGKEQ LSEDHPVPSM PVPLDMHVKN NTRIVVISGP NTGGKTATMK TLGLASLMSK AGMFFPAKGR PRLPWFDQVL ADIGDHQSLE NSLSTFSGNI
501: SRLRKIAQVV STDSLVLIDE IGSGTDPSEG VSLSTSILKY LASRLNLAVV TTHYADLSRL KAVDDRFENA AMEFCLKTLK PTYRVLWGST GNSNALSIAK
601: SIGFDQKVLD RAQEWVEKLL PDKQKERQGL LYGSLLDERN LLESQANEVA SVLSEVEDLY NEIRLEADEL DSRVAALKAK ESQKVQQELK SVKSQMDLLI
701: KNFEVQLKNS KLEQYNSIMR KAESATASLA AAHQPTEFAV SDDENKSSYV PQIGDKVYVE GLGGGSMATV VEILSEDGSC MVQYGKIKVR AKNNKMKLAQ
801: RDTKETSASS SAQGKGRAQK RSPAGTAATG SVSFAPAVQT SRNTVDLRGR RVGEASHELE MAIDECRPYQ VLFVVHGMGT GAVKECALDV LRSHPRVVRI
901: EDESPLNYGC TVAYIE
101: RSREESERLL EQTAAASLLT APLDFGGVGD VSAVVAAAAR GRLLAVREIC GVGRSLRAAR GVFDQVKRLA EEMPADGRYS SLLDILQGCD FLTELVKMIE
201: FCLDSNLSMV LDRASERLGA IRKERKMNVE MLESLLRDTS VKIFQAGGVD SPVVTKRRSR MCVGVKASHK HLVPGGIVLS SSGSGVTYFM EPRDAVKLNN
301: TEVKLSGDER AEELAVLGLL TSRIAESRMK IRHLMGKILE LDLACARGSY ALWINGVRPA FSDRDSSSES DPSGAYSVFI EGIQHPLLLE QSLGTVEELS
401: TEATEVGKEQ LSEDHPVPSM PVPLDMHVKN NTRIVVISGP NTGGKTATMK TLGLASLMSK AGMFFPAKGR PRLPWFDQVL ADIGDHQSLE NSLSTFSGNI
501: SRLRKIAQVV STDSLVLIDE IGSGTDPSEG VSLSTSILKY LASRLNLAVV TTHYADLSRL KAVDDRFENA AMEFCLKTLK PTYRVLWGST GNSNALSIAK
601: SIGFDQKVLD RAQEWVEKLL PDKQKERQGL LYGSLLDERN LLESQANEVA SVLSEVEDLY NEIRLEADEL DSRVAALKAK ESQKVQQELK SVKSQMDLLI
701: KNFEVQLKNS KLEQYNSIMR KAESATASLA AAHQPTEFAV SDDENKSSYV PQIGDKVYVE GLGGGSMATV VEILSEDGSC MVQYGKIKVR AKNNKMKLAQ
801: RDTKETSASS SAQGKGRAQK RSPAGTAATG SVSFAPAVQT SRNTVDLRGR RVGEASHELE MAIDECRPYQ VLFVVHGMGT GAVKECALDV LRSHPRVVRI
901: EDESPLNYGC TVAYIE
001: MNTYSPLQLI PTPIHLKSSR AASPSSLRVA SPLIIRAASS DDSQSVENQT LEVLEWRALC NQLSPFASTT MGLSATKNAE IPVGNSPEES RNLLNETSAA
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
101: LAAMEMMKSR GLGLSEIQDL SDIVERAVSG QLLTVRELCT VRSTLTAATS TFQKLRKAAI SDNRVTPLVD ILQGCDFKDT LQQKISFCID CNMTMILDRA
201: SEDLEIIRSE RRRNMENLDS LLKKISTKIF LAGGINKPLI TQRRSRMCVA IRATHKSLLP GGVVLSVSSS RATCFIEPKE AVELNNMEVR HANSEKAEEM
301: AILSILTSEV VMAQREILHL LDRILELDIA FARASHANWI NGVYPNVTSE HTKTPGLAVD IDSAQHPLLL GSVLGSPNGG DIFPVPVDIK VESSAKVVVI
401: SGPNTGGKTA LLKTLGLLSL MSKSGMYLPA KNCPRLPWFD LILADIGDPQ SLEQSLSTFS GHISRIRQIL DIASENSLVL LDEICSGTDP SEGVALATSI
501: LQYIKNRVNV AVVSTHYGDL SRLKDNEPRF QNAAMEFSME TLQPTFRVLW GSTGLSNALR VAKSIGFNKR ILENAHKWTE KLNPEQDVER KGSLFQSLME
601: ERNKLKLQAT KTAAFHRDLM NLYHELEHES HDLDKRERAL LKKETQKVQE DLNSAKSKME RLVAEFESQL EITQADQYNS LILKTEEAVA EIIEACCPMD
701: PDSLEEEYSD YSPQAGEKVL VTGLGDKLGT VVEEPGDDDD TVLVQHGKIR VRIKKKDIKP LPRSTSSQTS NRSLRSKRQI NMKELGSVLQ MQSEPVRIQT
801: SKNTLDLRGM RAEEAVHQLD MAISGRDSGS ILFIIHGMGA GIIKELVLER LRKNTRVSRY EQANPMNHGC TVAYIK
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:Q9SS53]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.