Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • mitochondrion 4
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G119400.1 Wheat mitochondrion 96.4 96.4
TraesCS3B01G136600.1 Wheat mitochondrion 96.4 96.4
Os01t0180600-01 Rice mitochondrion, nucleus 77.17 77.04
KXG31683 Sorghum mitochondrion, nucleus 72.91 72.38
Zm00001d039596_P004 Maize nucleus 71.36 70.38
GSMUA_Achr7P13290_001 Banana cytosol, plastid 52.37 57.45
Solyc07g018350.2.1 Tomato nucleus 36.58 55.12
VIT_11s0016g04090.t01 Wine grape nucleus 48.36 52.58
CDY25338 Canola plastid 46.4 51.55
CDY47171 Canola mitochondrion, nucleus 45.83 51.24
Bra028373.1-P Field mustard mitochondrion, plastid 46.48 51.22
AT3G24495.1 Thale cress mitochondrion 46.4 51.13
KRH39265 Soybean mitochondrion 44.93 50.88
KRH48416 Soybean cytosol 45.01 48.72
TraesCS5A01G206300.1 Wheat mitochondrion 25.37 23.5
TraesCS2A01G171900.1 Wheat cytosol 13.26 20.0
TraesCS1A01G135100.1 Wheat nucleus 14.57 18.56
TraesCS1A01G315900.1 Wheat cytosol 11.87 17.73
TraesCS2A01G362100.1 Wheat mitochondrion, nucleus 12.85 13.92
TraesCS2A01G588000.2 Wheat plastid 8.27 11.03
TraesCS1A01G179700.1 Wheat plastid 7.2 10.58
Protein Annotations
Gene3D:1.10.1420.10MapMan:14.7.1.4Gene3D:3.30.420.110Gene3D:3.40.1170.10Gene3D:3.40.50.300InterPro:DNA_mismatch_repair_Msh2
InterPro:DNA_mismatch_repair_MutS-lik_NInterPro:DNA_mismatch_repair_MutS_CInterPro:DNA_mismatch_repair_MutS_NInterPro:DNA_mismatch_repair_MutS_coreInterPro:DNA_mismatch_repair_MutS_sfInterPro:DNA_mmatch_repair_MutS_con_dom
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005524
GO:GO:0006139GO:GO:0006259GO:GO:0006298GO:GO:0006950GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0030983InterPro:IPR016151InterPro:IPR036678InterPro:MutS_con_dom_sfInterPro:P-loop_NTPase
PFAM:PF00488PFAM:PF01624PFAM:PF05188PFAM:PF05192PIRSF:PIRSF005813ScanProsite:PS00486
PANTHER:PTHR11361PANTHER:PTHR11361:SF121SMART:SM00533SMART:SM00534SUPFAM:SSF48334SUPFAM:SSF52540
SUPFAM:SSF53150SUPFAM:SSF55271EnsemblPlantsGene:TraesCS3A01G117500EnsemblPlants:TraesCS3A01G117500.1SEG:seg:
Description
No Description!
Coordinates
chr3A:+:87372551..87382806
Molecular Weight (calculated)
134532.0 Da
IEP (calculated)
8.212
GRAVY (calculated)
-0.281
Length
1222 amino acids
Sequence
(BLAST)
0001: MQPRRQQQQS ILPFLHPRQG PAQEAPGAGR TPERPPRPPA ASSVDGIMER LVRPPSQGRN KDAAQIRNAE RALPGRNEDT SNEQPSASFP VRHNGKYSRG
0101: TVLFAEHSTD TTPPQEPLKF SARSSTDEFV RASTLFPELG YPTLLQECPK KLSSECPSNQ YVQANSVFEA FDVQTPSQDP LKRIFSGPFH GADTPLSEYR
0201: SYPIPLQHPS KKSSSGSSSG EYLRAVTPLG LDSNDTPIAK HSKKLFSGSS DHSYIKATNL FPEFDSNGTP LQNHLNKFSV SMNGKHIGAP ATLFPELDSV
0301: LLKPETPVTR AVAPRGKRVQ QDQCMTANNS QSPLWGSNKK VKSAHCSPAG KMAHDEMAES ARSKFEWLNP LNIRDANKRR PDDPLYDKRT LFIPPDALRK
0401: MSTSQKQYWT IKCKYMDVLL FFKVGKFYEL YEVDAEIGQK ELDWKMTISG VGKCRQVGIS ESGIDDAVEK LLARGYKVGR IEQMESAAQA KSRGPNSVIE
0501: RKLAHVSTPS TAADSNIGPD AVHLLALKEV TLASNGSRVY GFAFLDYAAL KIWVGSLQDD DSSAALGALL VQVSPREIIY ESSGLSRESR KSMIKYASAG
0601: SVKMQLTPLP GTGFSDASQI QMLVHSKGYF KASTDSWLSA LDYSVNRDAV IFALGGLIGH LTRLMLDDAL KNGEVLPYNV YQTCLRMDGQ TLVNLEIFGN
0701: NFDGGSSGTL YKHLNHCITA SGKRLLRRWI CHPLKDVDAI NRRLDVVEGF IQHCGVGSIT LYYLRKIPDL ERLLGRIRST VGLTSAVLLP FVGEKILKRR
0801: IKTFGMLIKG LRVGIDLLSA LRRDDHGIPA LSKSVDIPTL SSLDELVHQF EEDIHNDFEQ YQDHDIKDGD ATTLANLVEH FVGKATEWSL VINAISTVDV
0901: LRSFAAMALS SFGTMCRPCI LLKDKSPILR MKGLWHPYAF AESGTGLVPN DLSLGQDLSG HNRFALLLTG PNMGGKSTIM RATCLAIVLA QLGCYVPCIS
1001: CELTLADSIF TRLGATDRIM SGESTFLVEC SETASVLQNA TEDSLVLLDE LGRGTSTFDG YAIAYAVFRH LVEQVRCRLL FATHYHPLTK EFASHPHVSL
1101: QHMACMLRPR SGGNGEMELT FLYRLASGAS PESYGLQVAT MAGIPKSIVE KAAVAGEMMK SRIAGNFRSS EGRAEFSTLH EDWLQTILAI GGVKDAHLDE
1201: DTMDTMFCVA QELKSHFRKV GR
Best Arabidopsis Sequence Match ( AT3G24495.1 )
(BLAST)
0001: MQRQRSILSF FQKPTAATTK GLVSGDAASG GGGSGGPRFN VKEGDAKGDA SVRFAVSKSV DEVRGTDTPP EKVPRRVLPS GFKPAESAGD ASSLFSNIMH
0101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
0201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
0301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
0401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
0501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
0601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
0701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
0801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD
0901: RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG
1001: CDQDLVFLYR LTEGACPESY GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA HNNAPIGEDD YDTLFCLWHE
1101: IKSSYCVPK
Arabidopsis Description
MSH7DNA mismatch repair protein MSH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMV7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.