Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039596_P004 | Maize | nucleus | 89.03 | 88.46 |
| TraesCS3B01G136600.1 | Wheat | mitochondrion | 72.54 | 73.08 |
| TraesCS3D01G119400.1 | Wheat | mitochondrion | 72.46 | 73.0 |
| TraesCS3A01G117500.1 | Wheat | mitochondrion, nucleus | 72.38 | 72.91 |
| Os01t0180600-01 | Rice | mitochondrion, nucleus | 72.38 | 72.79 |
| GSMUA_Achr7P13290_001 | Banana | cytosol, plastid | 50.12 | 55.39 |
| Solyc07g018350.2.1 | Tomato | nucleus | 35.58 | 54.01 |
| VIT_11s0016g04090.t01 | Wine grape | nucleus | 48.66 | 53.29 |
| CDY25338 | Canola | plastid | 46.06 | 51.55 |
| CDY47171 | Canola | mitochondrion, nucleus | 45.57 | 51.33 |
| Bra028373.1-P | Field mustard | mitochondrion, plastid | 46.22 | 51.31 |
| AT3G24495.1 | Thale cress | mitochondrion | 45.65 | 50.68 |
| KRH39265 | Soybean | mitochondrion | 44.19 | 50.42 |
| KRH48416 | Soybean | cytosol | 43.87 | 47.83 |
| KXG35601 | Sorghum | mitochondrion, nucleus, plastid | 25.02 | 23.62 |
| EER99382 | Sorghum | cytosol | 13.08 | 20.05 |
| EER99643 | Sorghum | nucleus | 14.87 | 19.43 |
| EES11671 | Sorghum | plastid | 16.9 | 18.91 |
| OQU78247 | Sorghum | cytosol | 11.29 | 17.71 |
| KXG26672 | Sorghum | mitochondrion, nucleus | 12.51 | 13.62 |
| OQU91528 | Sorghum | plastid | 7.55 | 11.19 |
| EES11666 | Sorghum | plastid | 8.12 | 10.96 |
| EES13125 | Sorghum | cytosol | 0.08 | 0.5 |
Protein Annotations
| Gene3D:1.10.1420.10 | MapMan:14.7.1.4 | Gene3D:3.30.420.110 | Gene3D:3.40.1170.10 | Gene3D:3.40.50.300 | UniProt:A0A1B6Q178 |
| InterPro:DNA_mismatch_repair_Msh2 | InterPro:DNA_mismatch_repair_MutS-lik_N | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_N | InterPro:DNA_mismatch_repair_MutS_core | InterPro:DNA_mismatch_repair_MutS_sf |
| InterPro:DNA_mmatch_repair_MutS_con_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0030983 | InterPro:IPR016151 | InterPro:IPR036678 | EnsemblPlants:KXG31683 |
| ProteinID:KXG31683 | ProteinID:KXG31683.1 | InterPro:MutS_con_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00488 | PFAM:PF01624 |
| PFAM:PF05188 | PFAM:PF05192 | PIRSF:PIRSF005813 | ScanProsite:PS00486 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF121 |
| SMART:SM00533 | SMART:SM00534 | EnsemblPlantsGene:SORBI_3003G041700 | SUPFAM:SSF48334 | SUPFAM:SSF52540 | SUPFAM:SSF53150 |
| SUPFAM:SSF55271 | UniParc:UPI00081AC8D3 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:3874482..3884370
Molecular Weight (calculated)
135984.0 Da
IEP (calculated)
7.939
GRAVY (calculated)
-0.252
Length
1231 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPRRRQQQQ SILSFLQKQP PSWRVPSGEG TPPEKPTRPP MGSIAGILER LVRPPPPPPQ ARNQYASQVR HLEGKNLPVE NQVLSNECSG ALFSRPIYGE
0101: DSRTILSSEG GGDMAPSQEP QMHSLRSSTD EFIGASTLLP ELGSNQAPIQ EYPKKLFSES HTNCIQATAL NENFDVQTPS QVASKKIFPG LAHGADTPLT
0201: GYGSDQTLLQ HSSKKFSLVS ANGQYTRAAV TGFGQNSNTT RAEEPSNMLC SGSSDPLYIR PTNLFAELEA NETPLKNHSK NSSLLTNSKY NLASAMLFPG
0301: LDSSPLKPET PAMQPVIPRL KRVQEDQSVD ANNQCPPLGA LNKKMKSAHC SIERKDHDEM ADSARSKFEW LNPFAIRDAN RRRPNDPLYD KSTLFIPPDA
0401: LRKMSTSQKQ YWNIKCKYMD VVLFFKVGKF YELYELDAEI GQKEFDWKMT ANGVGKCRQV GISESGIDDA VDKLVARGYK VGRIEQMESA NQAKARGLHS
0501: VIERKLVHVS TPSTAADNIG TDAVHLLALK EVTLASSSSQ VYGFAFLDYA ALKIWVGSVQ DDDSSAALGA LLMQVSPREL IYETSGITKE TQRTIRKYAS
0601: AGSVKMQLTP LSGIDFSDAS QIRMLIHSKG FFNASTESWL SALDCAVNRD VVICALGGLI GHLTRLMLHD ALKNGEVLPY HVYKTCLRMD GQTLVNLEIF
0701: SNNFNGGSSG TLYKHLNHCV TASGKRLLRR WICHPLKDID AINKRLDVVE GFIQNCGLGP TTLGYLRKIP DLERLLGQVR STVGLSSLLQ LPFIGEKILK
0801: RRIKTFTMLI NGLRNGIDLL SDLQRADHGV LALYKIVEIP SLNCLCELIH TFEERIQNDF PCGQDPDVDN NGANNLVRLV ELFIGKASEW SLVINAVSTI
0901: DVLRSFAAMT LSSFGAMCRP QVLLKDDVPI LRMKGLWHPY AFAENANGLV PNDLTLGQDL SGLNRFALLL TGPNMGGKST IMRATCLAVV LAQLGCYVPC
1001: TSCELTLADS IFTRLGATDR IMSGESTFLV ECTETASVLQ NATVDSLVLL DELGRGTSTF DGYAIAYAVF RHLVERVRCR QLFATHYHSL TKEFASHPHV
1101: SLQHMACMFK PRSDGNGQKE LTFLYRLTSG ACPESYGLQV ATMAGIPKSI VENASVAGQV MRSKIAENFR SSEQRAEFST LHEERLREAL AVSVQDGLLD
1201: DDIMDTLICV RQELKSHFRK SQMSIHFRKA R
0101: DSRTILSSEG GGDMAPSQEP QMHSLRSSTD EFIGASTLLP ELGSNQAPIQ EYPKKLFSES HTNCIQATAL NENFDVQTPS QVASKKIFPG LAHGADTPLT
0201: GYGSDQTLLQ HSSKKFSLVS ANGQYTRAAV TGFGQNSNTT RAEEPSNMLC SGSSDPLYIR PTNLFAELEA NETPLKNHSK NSSLLTNSKY NLASAMLFPG
0301: LDSSPLKPET PAMQPVIPRL KRVQEDQSVD ANNQCPPLGA LNKKMKSAHC SIERKDHDEM ADSARSKFEW LNPFAIRDAN RRRPNDPLYD KSTLFIPPDA
0401: LRKMSTSQKQ YWNIKCKYMD VVLFFKVGKF YELYELDAEI GQKEFDWKMT ANGVGKCRQV GISESGIDDA VDKLVARGYK VGRIEQMESA NQAKARGLHS
0501: VIERKLVHVS TPSTAADNIG TDAVHLLALK EVTLASSSSQ VYGFAFLDYA ALKIWVGSVQ DDDSSAALGA LLMQVSPREL IYETSGITKE TQRTIRKYAS
0601: AGSVKMQLTP LSGIDFSDAS QIRMLIHSKG FFNASTESWL SALDCAVNRD VVICALGGLI GHLTRLMLHD ALKNGEVLPY HVYKTCLRMD GQTLVNLEIF
0701: SNNFNGGSSG TLYKHLNHCV TASGKRLLRR WICHPLKDID AINKRLDVVE GFIQNCGLGP TTLGYLRKIP DLERLLGQVR STVGLSSLLQ LPFIGEKILK
0801: RRIKTFTMLI NGLRNGIDLL SDLQRADHGV LALYKIVEIP SLNCLCELIH TFEERIQNDF PCGQDPDVDN NGANNLVRLV ELFIGKASEW SLVINAVSTI
0901: DVLRSFAAMT LSSFGAMCRP QVLLKDDVPI LRMKGLWHPY AFAENANGLV PNDLTLGQDL SGLNRFALLL TGPNMGGKST IMRATCLAVV LAQLGCYVPC
1001: TSCELTLADS IFTRLGATDR IMSGESTFLV ECTETASVLQ NATVDSLVLL DELGRGTSTF DGYAIAYAVF RHLVERVRCR QLFATHYHSL TKEFASHPHV
1101: SLQHMACMFK PRSDGNGQKE LTFLYRLTSG ACPESYGLQV ATMAGIPKSI VENASVAGQV MRSKIAENFR SSEQRAEFST LHEERLREAL AVSVQDGLLD
1201: DDIMDTLICV RQELKSHFRK SQMSIHFRKA R
0001: MQRQRSILSF FQKPTAATTK GLVSGDAASG GGGSGGPRFN VKEGDAKGDA SVRFAVSKSV DEVRGTDTPP EKVPRRVLPS GFKPAESAGD ASSLFSNIMH
0101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
0201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
0301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
0401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
0501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
0601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
0701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
0801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD
0901: RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG
1001: CDQDLVFLYR LTEGACPESY GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA HNNAPIGEDD YDTLFCLWHE
1101: IKSSYCVPK
0101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
0201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
0301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
0401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
0501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
0601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
0701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
0801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD
0901: RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG
1001: CDQDLVFLYR LTEGACPESY GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA HNNAPIGEDD YDTLFCLWHE
1101: IKSSYCVPK
Arabidopsis Description
MSH7DNA mismatch repair protein MSH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMV7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.