Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g018350.2.1 | Tomato | nucleus | 48.67 | 67.45 |
| KRH39265 | Soybean | mitochondrion | 62.1 | 64.69 |
| AT3G24495.1 | Thale cress | mitochondrion | 62.28 | 63.12 |
| CDY25338 | Canola | plastid | 61.03 | 62.36 |
| CDY47171 | Canola | mitochondrion, nucleus | 60.5 | 62.21 |
| Bra028373.1-P | Field mustard | mitochondrion, plastid | 61.12 | 61.95 |
| KRH48416 | Soybean | cytosol | 61.21 | 60.94 |
| GSMUA_Achr7P13290_001 | Banana | cytosol, plastid | 59.34 | 59.87 |
| TraesCS3B01G136600.1 | Wheat | mitochondrion | 53.65 | 49.35 |
| Os01t0180600-01 | Rice | mitochondrion, nucleus | 53.11 | 48.77 |
| TraesCS3D01G119400.1 | Wheat | mitochondrion | 53.02 | 48.77 |
| KXG31683 | Sorghum | mitochondrion, nucleus | 53.29 | 48.66 |
| TraesCS3A01G117500.1 | Wheat | mitochondrion, nucleus | 52.58 | 48.36 |
| Zm00001d039596_P004 | Maize | nucleus | 52.85 | 47.94 |
| VIT_07s0005g01370.t01 | Wine grape | plastid | 29.72 | 25.75 |
| VIT_16s0100g01310.t01 | Wine grape | plastid | 20.55 | 20.79 |
| VIT_17s0000g04170.t01 | Wine grape | cytosol | 17.44 | 20.74 |
| VIT_00s0485g00020.t01 | Wine grape | mitochondrion, plastid | 8.27 | 19.79 |
| VIT_00s0388g00030.t01 | Wine grape | plastid | 8.45 | 19.39 |
| VIT_19s0090g00670.t01 | Wine grape | cytosol | 12.46 | 17.65 |
| VIT_00s0229g00200.t01 | Wine grape | cytosol | 1.96 | 15.28 |
| VIT_16s0098g00680.t01 | Wine grape | cytosol, plastid | 9.61 | 13.2 |
| VIT_00s0229g00210.t01 | Wine grape | endoplasmic reticulum, golgi | 2.94 | 12.69 |
| VIT_05s0049g02090.t01 | Wine grape | mitochondrion | 12.9 | 12.67 |
Protein Annotations
Description
No Description!
Coordinates
chr11:+:3341776..3358113
Molecular Weight (calculated)
124192.0 Da
IEP (calculated)
6.994
GRAVY (calculated)
-0.251
Length
1124 amino acids
Sequence
(BLAST)
(BLAST)
0001: MQRQKSILSF FQKPSPEDQK CGGSSAADTS AGRSVSQFPA KQRNQNFAVG DQPTFQIPKH SSMEITGTDT PPEKVPRQMI PASFTANDDR KAASSSSSLF
0101: SSIMHKFVKV DERESSCERK EMHSGSSNTC STSVNSDCEV LPKEGNVFHS DAKESGFNST KQVNQVCSLH SESGDDDIIG PETPGMRPFV PRLKRIQEDN
0201: FENKNECSLL DSSKRLKLLQ NSTTGNKNYG EVSDTTSKFE WLDPSRKRDA NRRRPGDALY DKRTLYIPPD ALQKMSASQK QYWSIKCQYM DVVLFFKVGK
0301: FYELYELDAE IGHKELDWKM TFSGVGKCRQ VGISESGIDE AVQKLIARGY KVGRMEQLET SEQAKARGST SVIQRKLVHV VTPSTACDGN IGPDAVHLLS
0401: VKEGNNILEN GSVIYGFAFV DCAALKFWIG SISDDASCAA LGALLMQVSP KEVIYENQEL SKEAQKALKK YSLSGFTALK LTPLPLCTDF VDASKVRNLI
0501: HLKGYFKGSD NSWDHALDGV MHHDLALCAL GGLLGHLSRL KLDDTLRNGD ILPYQVYSGC LRMDGQTLVN LEIFSNNADG GSSGKCTLYK YLDNCVTSSG
0601: KRLLRNWICH PLKDVQGINN RLNVVEHLMT NTETMSFIAQ CLRKLPDLER LLGQVKASVQ SSALLLLPFF GKKLLKQRVK VFGLLVKGLR VAIDLLVQLQ
0701: KEGHIMPSLS EVLKLPMLSG SSGVDKLLTQ FEAAIDSDFP NYENHDVTDS DAEILSILIE LFIEKTTQWL QVIHAINHID VLRSFAVIAN FSCGAMSRPV
0801: ILPHSEPATL SGETRGPLLK IRGLWHPFAI GENGGLPVPN DIHLGEDTDG NHPRTLLLTG PNMGGKSTLL RATCLAVILA QLGSYVPCKM CILSLVDVVF
0901: TRLGATDRIM TGESTFFIEC TETASVLRNA TQDSLVLLDE LGRGTSTFDG YAIAYAVFRH LVEKVNCRLL FATHYHPLTK EFASHPHVTL QHMACTFNLK
1001: GEKSSGGEQE LVFLYQLTSG ACPESYGLQV ALMAGVPKEV VEAASTAGRM MKQSIGESFR TSEQRSEFST LHEEWLKALL TVSRLGEHNF DDDAWDTLFC
1101: LWHEMKSSCQ STNSRKALNS QIAP
0101: SSIMHKFVKV DERESSCERK EMHSGSSNTC STSVNSDCEV LPKEGNVFHS DAKESGFNST KQVNQVCSLH SESGDDDIIG PETPGMRPFV PRLKRIQEDN
0201: FENKNECSLL DSSKRLKLLQ NSTTGNKNYG EVSDTTSKFE WLDPSRKRDA NRRRPGDALY DKRTLYIPPD ALQKMSASQK QYWSIKCQYM DVVLFFKVGK
0301: FYELYELDAE IGHKELDWKM TFSGVGKCRQ VGISESGIDE AVQKLIARGY KVGRMEQLET SEQAKARGST SVIQRKLVHV VTPSTACDGN IGPDAVHLLS
0401: VKEGNNILEN GSVIYGFAFV DCAALKFWIG SISDDASCAA LGALLMQVSP KEVIYENQEL SKEAQKALKK YSLSGFTALK LTPLPLCTDF VDASKVRNLI
0501: HLKGYFKGSD NSWDHALDGV MHHDLALCAL GGLLGHLSRL KLDDTLRNGD ILPYQVYSGC LRMDGQTLVN LEIFSNNADG GSSGKCTLYK YLDNCVTSSG
0601: KRLLRNWICH PLKDVQGINN RLNVVEHLMT NTETMSFIAQ CLRKLPDLER LLGQVKASVQ SSALLLLPFF GKKLLKQRVK VFGLLVKGLR VAIDLLVQLQ
0701: KEGHIMPSLS EVLKLPMLSG SSGVDKLLTQ FEAAIDSDFP NYENHDVTDS DAEILSILIE LFIEKTTQWL QVIHAINHID VLRSFAVIAN FSCGAMSRPV
0801: ILPHSEPATL SGETRGPLLK IRGLWHPFAI GENGGLPVPN DIHLGEDTDG NHPRTLLLTG PNMGGKSTLL RATCLAVILA QLGSYVPCKM CILSLVDVVF
0901: TRLGATDRIM TGESTFFIEC TETASVLRNA TQDSLVLLDE LGRGTSTFDG YAIAYAVFRH LVEKVNCRLL FATHYHPLTK EFASHPHVTL QHMACTFNLK
1001: GEKSSGGEQE LVFLYQLTSG ACPESYGLQV ALMAGVPKEV VEAASTAGRM MKQSIGESFR TSEQRSEFST LHEEWLKALL TVSRLGEHNF DDDAWDTLFC
1101: LWHEMKSSCQ STNSRKALNS QIAP
0001: MQRQRSILSF FQKPTAATTK GLVSGDAASG GGGSGGPRFN VKEGDAKGDA SVRFAVSKSV DEVRGTDTPP EKVPRRVLPS GFKPAESAGD ASSLFSNIMH
0101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
0201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
0301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
0401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
0501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
0601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
0701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
0801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD
0901: RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG
1001: CDQDLVFLYR LTEGACPESY GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA HNNAPIGEDD YDTLFCLWHE
1101: IKSSYCVPK
0101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
0201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
0301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
0401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
0501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
0601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
0701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
0801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATCLAV IFAQLGCYVP CESCEISLVD TIFTRLGASD
0901: RIMTGESTFL VECTETASVL QNATQDSLVI LDELGRGTST FDGYAIAYSV FRHLVEKVQC RMLFATHYHP LTKEFASHPR VTSKHMACAF KSRSDYQPRG
1001: CDQDLVFLYR LTEGACPESY GLQVALMAGI PNQVVETASG AAQAMKRSIG ENFKSSELRS EFSSLHEDWL KSLVGISRVA HNNAPIGEDD YDTLFCLWHE
1101: IKSSYCVPK
Arabidopsis Description
MSH7DNA mismatch repair protein MSH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMV7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.