Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400057653 | Potato | plastid | 12.69 | 3.61 |
| Zm00001d001806_P001 | Maize | plastid | 15.74 | 3.44 |
| EES11666 | Sorghum | plastid | 15.74 | 3.4 |
| PGSC0003DMT400021699 | Potato | cytosol | 2.54 | 3.14 |
| HORVU2Hr1G118740.5 | Barley | plastid | 13.71 | 3.09 |
| TraesCS2A01G588000.2 | Wheat | plastid | 13.2 | 2.84 |
| TraesCS2D01G565200.1 | Wheat | plastid | 13.2 | 2.84 |
| TraesCS2B01G595200.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 13.2 | 2.83 |
| PGSC0003DMT400021697 | Potato | cytosol, extracellular, nucleus | 2.54 | 2.49 |
| PGSC0003DMT400032552 | Potato | cytosol, peroxisome, plastid | 4.57 | 2.13 |
| PGSC0003DMT400010422 | Potato | cytosol | 6.09 | 1.27 |
| KRG88725 | Soybean | nucleus | 0.0 | 0.0 |
| KRH33415 | Soybean | cytosol, extracellular, plastid | 0.0 | 0.0 |
| Os04t0680700-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400001555 | EnsemblPlantsGene:PGSC0003DMG400000575 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF81 | PGSC:PGSC0003DMG400000575 | SEG:seg |
| UniParc:UPI0002954A0E | UniProt:M0ZIP3 | MapMan:35.2 | : | : | : |
Description
DNA mismatch repair muts family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000575]
Coordinates
chr3:-:47183070..47187270
Molecular Weight (calculated)
22158.8 Da
IEP (calculated)
10.697
GRAVY (calculated)
-0.612
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MPDVIVHKAR ELYGTASAEI NEVILDMERF KQNFHEQVHE SQRLLKLTKG LHHKLLIARK NVKEHSINQR FRKEQEISEA AAVARSSIQR RARQYRAISS
101: QPSQKILGSN GHTSTMKSEA KEEKGEISEA TPAVYSPSTS RLPVSAKRRK LPNVGDSVHV PSLNKQALVL KVDPSREELL VQAGNMKLKL KLTDVLA
101: QPSQKILGSN GHTSTMKSEA KEEKGEISEA TPAVYSPSTS RLPVSAKRRK LPNVGDSVHV PSLNKQALVL KVDPSREELL VQAGNMKLKL KLTDVLA
001: MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:F4JYU0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.