Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G179700.1 | Wheat | plastid | 97.48 | 97.48 |
| TraesCS1B01G200700.1 | Wheat | plastid | 97.0 | 97.46 |
| HORVU1Hr1G047640.7 | Barley | plastid | 96.15 | 91.64 |
| Os10t0509000-01 | Rice | cytosol, nucleus | 53.61 | 82.29 |
| OQU91528 | Sorghum | plastid | 78.0 | 78.1 |
| Zm00001d013887_P002 | Maize | plastid | 73.08 | 71.28 |
| GSMUA_Achr1P01790_001 | Banana | mitochondrion | 18.99 | 70.85 |
| GSMUA_Achr1P01810_001 | Banana | extracellular, plasma membrane | 21.88 | 57.05 |
| VIT_16s0098g00680.t01 | Wine grape | cytosol, plastid | 49.4 | 50.24 |
| KRH72584 | Soybean | plastid | 46.88 | 49.37 |
| KRH16965 | Soybean | cytosol, mitochondrion, nucleus, plastid | 31.61 | 48.61 |
| Solyc03g080010.2.1 | Tomato | plastid | 47.72 | 48.06 |
| AT5G54090.1 | Thale cress | plastid | 45.07 | 47.11 |
| CDY41773 | Canola | plastid | 44.35 | 46.07 |
| CDY28796 | Canola | plastid | 44.11 | 45.76 |
| Bra022693.1-P | Field mustard | plastid | 43.99 | 45.64 |
| GSMUA_Achr1P01820_001 | Banana | plastid | 11.9 | 42.13 |
| KRH16964 | Soybean | cytosol, nucleus | 7.09 | 35.54 |
| TraesCS2D01G565200.1 | Wheat | plastid | 26.92 | 24.43 |
| TraesCS1D01G316200.1 | Wheat | cytosol | 10.58 | 10.77 |
| TraesCS2D01G352400.1 | Wheat | cytosol | 12.14 | 10.37 |
| TraesCS1D01G131600.3 | Wheat | nucleus | 11.66 | 10.3 |
| TraesCS2D01G359500.1 | Wheat | mitochondrion | 13.82 | 10.2 |
| TraesCS5D01G212500.1 | Wheat | nucleus | 11.66 | 8.52 |
| TraesCS3D01G119400.1 | Wheat | mitochondrion | 10.58 | 7.2 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DNA_mismatch_repair_MutS_C | InterPro:DNA_mismatch_repair_MutS_core | InterPro:DNA_mismatch_repair_MutS_sf |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004518 |
| GO:GO:0004519 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0030983 | GO:GO:0045910 | InterPro:MutS2 | InterPro:P-loop_NTPase | PFAM:PF00488 | PIRSF:PIRSF005814 |
| ScanProsite:PS00486 | PANTHER:PTHR11361 | PANTHER:PTHR11361:SF81 | SMART:SM00533 | SMART:SM00534 | SUPFAM:SSF48334 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1D01G178000 | EnsemblPlants:TraesCS1D01G178000.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1D:-:253059200..253069886
Molecular Weight (calculated)
91037.4 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.201
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRLSASFSL LDPPSLSPSV SHLRPRRLRA LVVAASASPS ARSLRLLEWG KVCRAVASFA GTAHGREATE KQLWGVESVS YERSRKLLRE TEAAVRLLGS
101: SGGALDFSGL DTVAVESAIN CVSGGSVIKG QEAMAVVSLM LFVESLQVTI RAAMKQDEDS HNLLLPLTET ILDAVVSKLL VKSIQDVIDD DGSVKDTASP
201: ELRRYRDQVQ ALESRLCQLM DKLIRNADNE ASLSEVSIVN GRCCIKITGD KSSSFDGLLL SSGSDAGSMI EPIIAVPLND ELQGARALVV RAELEALSKL
301: TDKILLELDN IQILMQETVT LDKVTARARY SIAYDGTLPD LYLPNIEHGI VNAAKDEPAS TTSSAQLTKR PWKLFIPNAY HPLLLQQHQE NLRRTKKDVA
401: SATAEIRRRR IYGQDIAEED QLASELDFMK IRVSELERNH PIPVDFMIAE ETTVLVITGP NTGGKTISLK TVGLASLMAK IGLYILASEP VKIPWFDAVY
501: ADIGDEQSLT QSLSTFSGHL KQIGAIRAQS TSQSLVLLDE VGAGTNPLEG AALGMSLLGS FAEAGSFLTL ATTHHGELKT LKYSNDSFEN ACVEFDEENL
601: KPTFRILWGI PGRSNAINIA ERLGLPLDII ESSRHLLGTA GAEINALIMD MEKFKQEYHE QLQQAQHYLM QSKELHNDLE VAQKSIVDHG IAQRKRKSRV
701: VSEYAVMARS IIHKKFQQYR ESAVAQRVLE EEKAAEKAKS EGAKGPEPAS TSAPKKTQNT NSSMVTEANG KIIDENGGIP EVGDLVYVPK LKNQATVVKI
801: DSSKNEVQVQ AGMMKLKLKL KDVKVQKQRT SR
101: SGGALDFSGL DTVAVESAIN CVSGGSVIKG QEAMAVVSLM LFVESLQVTI RAAMKQDEDS HNLLLPLTET ILDAVVSKLL VKSIQDVIDD DGSVKDTASP
201: ELRRYRDQVQ ALESRLCQLM DKLIRNADNE ASLSEVSIVN GRCCIKITGD KSSSFDGLLL SSGSDAGSMI EPIIAVPLND ELQGARALVV RAELEALSKL
301: TDKILLELDN IQILMQETVT LDKVTARARY SIAYDGTLPD LYLPNIEHGI VNAAKDEPAS TTSSAQLTKR PWKLFIPNAY HPLLLQQHQE NLRRTKKDVA
401: SATAEIRRRR IYGQDIAEED QLASELDFMK IRVSELERNH PIPVDFMIAE ETTVLVITGP NTGGKTISLK TVGLASLMAK IGLYILASEP VKIPWFDAVY
501: ADIGDEQSLT QSLSTFSGHL KQIGAIRAQS TSQSLVLLDE VGAGTNPLEG AALGMSLLGS FAEAGSFLTL ATTHHGELKT LKYSNDSFEN ACVEFDEENL
601: KPTFRILWGI PGRSNAINIA ERLGLPLDII ESSRHLLGTA GAEINALIMD MEKFKQEYHE QLQQAQHYLM QSKELHNDLE VAQKSIVDHG IAQRKRKSRV
701: VSEYAVMARS IIHKKFQQYR ESAVAQRVLE EEKAAEKAKS EGAKGPEPAS TSAPKKTQNT NSSMVTEANG KIIDENGGIP EVGDLVYVPK LKNQATVVKI
801: DSSKNEVQVQ AGMMKLKLKL KDVKVQKQRT SR
001: MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
101: AIKMLEHGSF CLDLSSIHIS LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH PVINRSFVKL VEQVIDPDGT
201: IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV MLAAEIDGRW CIQMSSNQLT SVNGLLLSSG SGGGTAAEPI AAVSMNDDLQ SARASVAKAE
301: AEILSMLTEK MQDGLCQIEV VLSYSIQLDV INARATYSRA YGGAHPDIYL PPEDEVESLS AGENSPDINL PSEKPLSKKE WLLYLPRCYH PLLLYQHKKG
401: IRKTRETVKF HKTADTVLSG APPIPADFQI SKGTRVLVIT GPNTGGKTIC LKSVGLAAMM AKSGLYVLAT ESARIPWFDN IYADIGDEQS LLQSLSTFSG
501: HLKQISEILS HSTSRSLVLL DEVGAGTNPL EGAALGMAIL ESFAESGSLL TMATTHHGEL KTLKYSNSAF ENACMEFDDL NLKPTYKILW GVPGRSNAIN
601: IADRLGLPCD IIESARELYG SASAEINEVI LDMERYKQEY QRLLNESRVY IRLSRELHEN LLTAQKNIND HSTKERRKMR QELTQAGSMT RSTLRRTLQQ
701: FRSSAGKSSQ SKVATQLQTK VKTTKDEDNG IRSSSVVERR PLPEAAAQKV PEVGSSVFVS SLGKKATVLK VEHSKKEILV QVGIMKMKVK LTDVVA
Arabidopsis Description
DNA mismatch repair protein MutS, type 2 [Source:UniProtKB/TrEMBL;Acc:F4JYU0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.